parseTcgaSampleInfo {psichomics}R Documentation

Parse sample information from TCGA samples

Description

Parse sample information from TCGA samples

Usage

parseTcgaSampleInfo(samples, match = NULL)

parseTCGAsampleInfo(samples, match = NULL)

Arguments

samples

Character: sample identifiers

match

Integer: match between samples and patients (NULL by default; performs the match)

Value

Data frame containing metadata associated with each TCGA sample

Examples

samples <- c("TCGA-3C-AAAU-01A-11R-A41B-07", "TCGA-3C-AALI-01A-11R-A41B-07",
             "TCGA-3C-AALJ-01A-31R-A41B-07", "TCGA-3C-AALK-01A-11R-A41B-07", 
             "TCGA-4H-AAAK-01A-12R-A41B-07", "TCGA-5L-AAT0-01A-12R-A41B-07")

parseTcgaSampleInfo(samples)

[Package psichomics version 1.10.1 Index]