summarise.Ranges {plyranges}R Documentation

Aggregate a Ranges object

Description

Aggregate a Ranges object

Usage

## S3 method for class 'Ranges'
summarise(.data, ...)

Arguments

.data

a Ranges object

...

Name-value pairs of summary functions.

Value

a S4Vectors::DataFrame()

See Also

dplyr::summarise()

Examples

df <- data.frame(start = 1:10, width = 5,  seqnames = "seq1",
strand = sample(c("+", "-", "*"), 10, replace = TRUE), gc = runif(10))
rng <- as_granges(df)
rng %>% summarise(gc = mean(gc))
rng %>% group_by(strand) %>% summarise(gc = mean(gc))

[Package plyranges version 1.4.1 Index]