buildZTestBackgroundModel {dagLogo}R Documentation

Build a background model for Z-test.

Description

Build a background model for Z-test.

Usage

buildZTestBackgroundModel(dagPeptides, matches, numSubsamples = 30L,
  rand.seed = 1, testType = "ztest", replacement = FALSE)

Arguments

dagPeptides

An object of dagPeptides-class Class containing peptide sequences as the input set.

matches

A character vector with the matched subsequences.

numSubsamples

An integer, the number of random sampling.

rand.seed

An integer, the seed used to perform random sampling

replacement

A logical vector of length 1, indicating whether replacement is allowed for random sampling.

Value

An object of dagBackground-class Class.

Author(s)

Jianhong Ou, Haibo Liu


[Package dagLogo version 1.22.0 Index]