plotOneFit {consensus} | R Documentation |
Plots a series of regressions of platform measurements against their consensus mean.
plotOneFit(multimeas, idx, pal=palette(), ...)
multimeas |
An object of class |
idx |
Row index of the set of matrices in |
pal |
Color palette. Length must be at least the length of multimeas@data. |
... |
Extra arguments passed to |
Visualises a row-linear fit explicitly in the measurement space. Steeper (positive) slopes mean greater sensitivity, and greater scatter around the regression line indicates lower precision.
A plot to the current device.
Tim Peters <t.peters@garvan.org.au>
data("TCGA") tcga_mm <- MultiMeasure(names=c("U133A", "Huex", "Agilent", "RNASeq"), data=list(U133A, Huex, Agilent, RNASeq)) plotOneFit(tcga_mm, "TP53", brewer.pal(n = 4, name = "Dark2"))