guess_best_k-ConsensusPartitionList-method {cola} | R Documentation |
Guess the best number of partitions
## S4 method for signature 'ConsensusPartitionList' guess_best_k(object, rand_index_cutoff = 0.95)
object |
a |
rand_index_cutoff |
the Rand index compared to previous k is larger than this, it is filtered out. |
It basically gives the best k for each combination of top-value method and partition method by calling guess_best_k,ConsensusPartition-method
.
A data frame with the best k and other statistics for each combination of methods.
Zuguang Gu <z.gu@dkfz.de>
data(cola_rl) guess_best_k(cola_rl)