get_classes-ConsensusPartition-method {cola} | R Documentation |
Get class IDs from the ConsensusPartition object
## S4 method for signature 'ConsensusPartition' get_classes(object, k = object@k)
object |
a |
k |
number of partitions. |
A data frame with class IDs and other columns which are entropy of the percent membership matrix and the silhouette scores which measure the stability of a sample to stay in its group.
If k
is not specified, it returns a data frame with class IDs from every k.
Zuguang Gu <z.gu@dkfz.de>
data(cola_rl) obj = cola_rl["sd", "kmeans"] get_classes(obj, k = 2) get_classes(obj)