dimension_reduction-matrix-method {cola} | R Documentation |
Visualize columns after dimension reduction
## S4 method for signature 'matrix' dimension_reduction(object, pch = 16, col = "black", cex = 1, main = "", method = c("PCA", "MDS", "t-SNE", "UMAP"), control = list(), scale_rows = TRUE, internal = FALSE, verbose = TRUE)
object |
a numeric matrix. |
method |
which method to reduce the dimension of the data. |
control |
|
pch |
shape of points. |
col |
color of points. |
cex |
size of points. |
main |
title of the plot. |
scale_rows |
whether perform scaling on matrix rows. |
internal |
internally used. |
verbose |
whether print messages. |
No value is returned.
Zuguang Gu <z.gu@dkfz.de>
# There is no example NULL