plotGridSearchPerplexitycelda_G {celda} | R Documentation |
Plots perplexity as a function of the gene (L) clusters as generated by celdaGridSearch().
plotGridSearchPerplexitycelda_G(celdaList, sep)
celdaList |
Object of class 'celdaList'. |
sep |
Numeric. Breaks in the x axis of the resulting plot. |
A ggplot plot object showing perplexity as a function of clustering parameters.
data(celdaCGSim, celdaCGGridSearchRes) celdaCGGridSearchRes <- resamplePerplexity( celdaCGSim$counts, celdaCGGridSearchRes) plotGridSearchPerplexity(celdaCGGridSearchRes)