filter_summary_bottom {animalcules}R Documentation

Data visualization by barplot

Description

Data visualization by barplot

Usage

filter_summary_bottom(MAE, samples_discard, filter_type, sample_condition)

Arguments

MAE

A multi-assay experiment object

samples_discard

The list of samples to filter

filter_type

Either 'By Microbes' or 'By Metadata'

sample_condition

Which condition to check e.g. 'SEX'

Value

A plotly object

Examples

data_dir = system.file('extdata/MAE.rds', package = 'animalcules')
toy_data <- readRDS(data_dir)
result <- filter_summary_bottom(toy_data,
                           samples_discard = c('subject_2', 'subject_4'),
                           filter_type = 'By Metadata',
                           sample_condition = 'SEX')
result


[Package animalcules version 1.0.0 Index]