matchedMetExp {TCGAbiolinks} | R Documentation |
For a given TCGA project it gets the samples (barcode) with both DNA methylation and Gene expression data from GDC database
matchedMetExp(project, legacy = FALSE, n = NULL)
project |
A GDC project |
legacy |
Access legacy (hg19) or harmonized database (hg38). |
n |
Number of samples to return. If NULL return all (default) |
A vector of barcodes
# Get ACC samples with both DNA methylation (HM450K) and gene expression aligned to hg19 samples <- matchedMetExp("TCGA-ACC", legacy = TRUE)