fn_gene_miRNA_F_test {SPONGE} | R Documentation |
Perform F test for gene-miRNA elastic net model
fn_gene_miRNA_F_test(g_expr, m_expr, model, p.adj.threshold = NULL)
g_expr |
A gene expression matrix with samples in rows and genes in columns |
m_expr |
A miRNA expression matrix with samples in rows and genes in columns. Sample number and order has to agree with above gene expression matrix |
model |
A nested elastic net model to be tested |
p.adj.threshold |
Threshold for FDR corrected p-value |
return data frame with miRNA, fstat and adjusted p.value (BH).