printMsigdbDataset {RCAS}R Documentation

Print MSIGDB Dataset to a file This function is used to print a MSIGDB dataset into a file. Mostly useful when human data is mapped to another species, and that mapping is required to run the report.

Description

Print MSIGDB Dataset to a file This function is used to print a MSIGDB dataset into a file. Mostly useful when human data is mapped to another species, and that mapping is required to run the report.

Usage

printMsigdbDataset(dataset, outputFilename)

Arguments

dataset

A list of vectors containing gene sets from MSIGDB

outputFilename

A character string that denotes the output file name

Value

A text file printed to the current directory

Examples

data(geneSets)
printMsigdbDataset(geneSets, 'output.gmt')


[Package RCAS version 1.10.0 Index]