validSeqlevels {ORFik}R Documentation

Helper function to find overlaping seqlevels

Description

Useful to avoid warnings in bioC

Usage

validSeqlevels(grl, reads)

Arguments

grl

a GRangesList or GRanges object

reads

a GRanges or GAlignment object

Value

a character vector of valid seqlevels


[Package ORFik version 1.4.0 Index]