validGRL {ORFik}R Documentation

Helper Function to check valid GRangesList input

Description

Helper Function to check valid GRangesList input

Usage

validGRL(class, type = "grl", checkNULL = FALSE)

Arguments

class

as character vector the given class of supposed GRangesList object

type

a character vector, is it gtf, cds, 5', 3', for messages.

checkNULL

should NULL classes be checked and return indeces of these?

Value

either NULL or indices (checkNULL == TRUE)

See Also

Other utils: bedToGR, convertToOneBasedRanges, findFa, fread.bed, is.gr_or_grl, is.grl


[Package ORFik version 1.4.0 Index]