addCdsOnLeaderEnds {ORFik} | R Documentation |
When finding uORFs, often you want to allow them to end inside the cds.
addCdsOnLeaderEnds(fiveUTRs, cds, onlyFirstExon = FALSE)
fiveUTRs |
The 5' leader sequences as GRangesList |
cds |
If you want to extend 5' leaders downstream, to catch uorfs going into cds, include it. |
onlyFirstExon |
logical (F), include whole cds or only first exons. |
This is a simple way to do that
a GRangesList of cds exons added to ends