loadTxdb {ORFik}R Documentation

General loader for txdb

Description

Useful to allow fast TxDb loader like .db

Usage

loadTxdb(txdb)

Arguments

txdb

a TxDb file or a path to one of: (.gtf ,.gff, .gff2, .gff2, .db or .sqlite)

Value

a TxDb object

Examples

library(GenomicFeatures)
# Get the gtf txdb file
txdbFile <- system.file("extdata", "hg19_knownGene_sample.sqlite",
                        package = "GenomicFeatures")
txdb <- loadDb(txdbFile)


[Package ORFik version 1.4.0 Index]