assignLastExonsStopSite {ORFik}R Documentation

Reassign the stop positions of the last exons per group

Description

make sure your grl is sorted, since stop of "-" strand objects should be the min start in group, use ORFik:::sortPerGroup(grl) to get sorted grl.

Usage

assignLastExonsStopSite(grl, newStops)

Arguments

grl

a GRangesList object

newStops

an integer vector of same length as grl, with new start values

Value

the same GRangesList with new stop sites

See Also

Other GRanges: assignFirstExonsStartSite, downstreamFromPerGroup, downstreamOfPerGroup, upstreamFromPerGroup, upstreamOfPerGroup


[Package ORFik version 1.4.0 Index]