addNewTSSOnLeaders {ORFik} | R Documentation |
add cage max peaks as new transcript start sites for each 5' leader (*) strands are not supported, since direction must be known.
addNewTSSOnLeaders(fiveUTRs, maxPeakPosition, removeUnused)
fiveUTRs |
The 5' leader sequences as GRangesList |
maxPeakPosition |
The max peak for each 5' leader found by cage |
removeUnused |
logical (FALSE), remove leaders that did not have any cage support. (standard is to set them to original annotation) |
a GRanges object of first exons