hasHits {ORFik}R Documentation

Hits from reads

Description

Finding GRanges groups that have overlap hits with reads Similar to

Usage

hasHits(grl, reads, keep.names = FALSE)

Arguments

grl

a GRanges or GRangesList

reads

a GAlignment or GRanges object with reads

keep.names

logical (F), keep names or not

Value

a list of logicals, T == hit, F == no hit


[Package ORFik version 1.4.0 Index]