numExonsPerGroup {ORFik} | R Documentation |
Can also be used generaly to get number of GRanges object per GRangesList group
numExonsPerGroup(grl, keep.names = TRUE)
grl |
a GRangesList |
keep.names |
a boolean, keep names or not |
an integer vector of counts
gr_plus <- GRanges(seqnames = c("chr1", "chr1"), ranges = IRanges(c(7, 14), width = 3), strand = c("+", "+")) gr_minus <- GRanges(seqnames = c("chr2", "chr2"), ranges = IRanges(c(4, 1), c(9, 3)), strand = c("-", "-")) grl <- GRangesList(tx1 = gr_plus, tx2 = gr_minus) numExonsPerGroup(grl)