raw.pd {MSstatsTMT} | R Documentation |
Example of Proteome discover PSM sheet. It is the input for PDtoMSstatsTMTFormat function, with annotation file. Annotation file should be made by users. It includes peak intensities for 10 proteins among 15 MS runs with TMT-10plex. The variables are as follows:
raw.pd
A data frame with 2858 rows and 50 variables.
Master.Protein.Accessions
Protein.Accessions
Annotated.Sequence
Charge
Ions.Score
Spectrum.File
Quan.Info
Channels : 126, ..., 131
head(raw.pd)