getAdditionalInfo {MIGSA}R Documentation

Gets additional information about enrichment results

Description

getAdditionalInfo gets additional enrichment information of the analysis done.

Usage

getAdditionalInfo(migsaRes)

## S4 method for signature 'MIGSAres'
getAdditionalInfo(migsaRes)

Arguments

migsaRes

MIGSAres object.

Value

data.frame with additional information for each analyzed gene set.

See Also

setEnrCutoff

Examples

data(migsaRes);

## Lets get additional enrichment information of the MIGSAres object.
adtnlInfo <- getAdditionalInfo(migsaRes);
dim(adtnlInfo); # it is a huge data.frame

## This huge amount of information commonly is not that interesting. Lets 
## keep the gene sets that were enriched in every experiment and check that 
## information. Lets set a cutoff of 0.1.
migsaResWCoff <- setEnrCutoff(migsaRes, 0.1);
migsaResFiltered <- migsaResWCoff[rowSums(migsaResWCoff[,4:5]) == 2,];
adtnlInfo <- getAdditionalInfo(migsaResFiltered);
dim(adtnlInfo);


[Package MIGSA version 1.8.0 Index]