totalCoverage {InPAS}R Documentation

total coverage

Description

for huge dataset, it will read in the coverage from tmp files and merge them by groups

Usage

totalCoverage(coverage, genome, hugeData, groupList=NULL)

Arguments

coverage

coverage for each sample, outputs of coverageFromBedGraph

genome

an object of BSgenome

hugeData

hugeData or not

groupList

tag names involved in each groups

Value

a coverage list

Author(s)

Jianhong Ou


[Package InPAS version 1.16.1 Index]