plotDists {GenomicInteractions}R Documentation

Plots a histogram of interaction distances for a GInteractions Object

Description

Plots a histogram of interaction distances for a GInteractions Object

Usage

plotDists(GIObject, breaks = c(0, 1000, 5000, 10000, 50000, 100000, 500000,
  1000000, 2000000), method = "midpoint")

Arguments

GIObject

A GInteractions object

breaks

A numeric vector of breaks for the histogram

method

Method used for distance between anchors. Passed to calculateDistances. One of "midpoint", "inner", or "outer".

Value

A ggplot2 plot

Examples

data(hic_example_data)
plotDists(hic_example_data)

[Package GenomicInteractions version 1.18.0 Index]