centEpiFibIC.m {EpiDISH}R Documentation

Reference for epithelial cells, fibroblasts, and total immune cells

Description

Similar to centDHSbloodDMC.m. But this referene contains centroids for epithelial cells, fibroblasts, and total immune cells.

Usage

data(centEpiFibIC.m)

Format

A matrix with 716 rows and 3 columns

Details

References

Zheng SC, Webster AP, Dong D, Feber A, Graham DG, Sullivan R, Jevons S, Lovat LB, Beck S, Widschwendter M, Teschendorff AE A novel cell-type deconvolution algorithm reveals substantial contamination by immune cells in saliva, buccal and cervix. Epigenomics (2018) 10: 925-940. doi: 10.2217/epi-2018-0037.


[Package EpiDISH version 2.0.0 Index]