Epigenetic Dissection of Intra-Sample-Heterogeneity


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Documentation for package ‘EpiDISH’ version 2.0.0

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CellDMC A method that allows the identification of differentially methylated cell-types and the estimated change of each cell-type
centBloodSub.m Whole blood reference of 188 tsDHS-DMCs and 7 blood cell subtypes
centDHSbloodDMC.m Whole blood reference of 333 tsDHS-DMCs and 8 blood cell subtypes
centEpiFibFatIC.m Reference for epithelial cells, fibroblasts, fat cells, and total immune cells
centEpiFibIC.m Reference for epithelial cells, fibroblasts, and total immune cells
DummyBeta.m Dummy beta value matrix
epidish Epigenetic Dissection of Intra-Sample-Heterogeneity
hepidish Hierarchical EpiDISH (HEpiDISH)