getBeta {ENmix}R Documentation

Extract Beta value.

Description

Extract Methylation Beta value, Beta = Meth / (Meth + Unmeth + offset)

Usage

getBeta(mdat,type="Illumina",offset=100)

Arguments

mdat

An object of class MethylSet.

type

type="Illumina" sets offset=100 as per Genome Studio.

offset

offset in calculating beta ratio

Value

beta: a matrix of beta values

Author(s)

Zongli Xu


[Package ENmix version 1.20.0 Index]