corrMatrixD_HC {DAPAR} | R Documentation |
exprs()
table.Correlation matrix based on a MSnSet
object. Same as the
function corrMatrixD but uses the package highcharter
corrMatrixD_HC(object, samplesData = NULL, rate = 0.5)
object |
The result of the |
samplesData |
A dataframe in which lines correspond to samples and columns to the meta-data for those samples. |
rate |
The rate parameter to control the exponential law for the gradient of colors |
A colored correlation matrix
Samuel Wieczorek
require(DAPARdata) data(Exp1_R25_pept) qData <- Biobase::exprs(Exp1_R25_pept) samplesData <- Biobase::pData(Exp1_R25_pept) res <- cor(qData,use = 'pairwise.complete.obs') corrMatrixD_HC(res, samplesData)