calcCoGAPSStat {CoGAPS} | R Documentation |
calculates the gene set statistics for each column of A using a Z-score from the elements of the A matrix, the input gene set, and permutation tests
calcCoGAPSStat(object, GStoGenes, numPerm = 500) ## S4 method for signature 'CogapsResult' calcCoGAPSStat(object, GStoGenes, numPerm = 500)
object |
an object of type CogapsResult |
GStoGenes |
data.frame or list with gene sets |
numPerm |
number of permutations for null |
gene set statistics for each column of A