Example data {ASpli}R Documentation

Example Aspli objects

Description

ASpli includes functions to easily build ASpli objects, used in examples in the vignette and man pages.

Usage

  aspliASexample()
  aspliBamsExample()
  aspliCountsExample()
  aspliDUexample1()
  aspliDUexample2()
  aspliExampleBamList()
  aspliExampleGTF()
  aspliFeaturesExample()
  aspliJunctionDUexample()
  aspliTargetsExample()

Value

An ASpli object with example data.

Author(s)

Estefania Mancini, Javier Iserte, Marcelo Yanovsky, Ariel Chernomoretz

Examples

  as <- aspliASexample()
  bams <- aspliBamsExample()
  counts <- aspliCountsExample()
  du1 <- aspliDUexample1()
  du2 <- aspliDUexample2()
  bamfiles <- aspliExampleBamList()
  gtffile <- aspliExampleGTF()
  features <- aspliFeaturesExample()
  jdu <- aspliJunctionDUexample()
  targets <-aspliTargetsExample()

[Package ASpli version 1.10.0 Index]