Counts accesors {ASpli}R Documentation

Accessors for ASpliCounts object

Description

Accessors for ASpliCounts object

Usage

countsb(x)
countse1i(x)
countsg(x)
countsie2(x)
countsj(x)
rdsg(x)
rdsb(x)

Arguments

x

An ASpliCounts object

Value

Returns dataframes with counts by sample and genomic metadata

Author(s)

Estefania Mancini, Marcelo Yanovsky, Ariel Chernomoretz

Examples


# Get data tables from an ASpliCounts object

counts <- aspliCountsExample() 

cb1  <- countsb(counts)
ce1i <- countse1i(counts)
cg   <- countsg(counts)
cie2 <- countsie2(counts)
cj   <- countsj(counts)
rg   <- rdsg(counts)
rb   <- rdsb(counts)

# Set data tables to an ASpliCounts object

countsb(counts)   <- cb1
countse1i(counts) <- ce1i
countsg(counts)   <- cg
countsie2(counts) <- cie2
countsj(counts)   <- cj
rdsg(counts)      <- rg
rdsb(counts)      <- rb


[Package ASpli version 1.10.0 Index]