getProbePositionsDf {Repitools} | R Documentation

## Translate Affymetrix probe information in a table.

### Description

Translates the probe information in the AromaCellPositionFile to a data.frame object.

### Usage

      ## S4 method for signature 'AffymetrixCdfFile'
    getProbePositionsDf(cdf, chrs, ..., verbose = TRUE)

### Arguments

`cdf` | An AffymetrixCdfFile object.
`chrs` | A vector of chromosome names. Optional.
`...` | Further arguments to send to `getCellIndices`.
`verbose` | Logical; whether or not to print out progress statements to the screen.

### Details

This assumes that the AromaCellPositionFile exist.

### Value

A data.frame with 3 columns: chr, position, index

### Author(s)

Mark Robinson

### Examples

    ## not run
    # probePositions <- getProbePositionsDf(cdfU)

[Package Repitools version 1.26.0 Index]