getcaBIOPATHList {GeneAnswers} | R Documentation

## Retrieve caBIO path categories containing given genes

### Description

Function to retrieve caBIO pathway IDss containing the given genes. This function is not supported starting this version due to the termination of the caBig project.

### Usage

    getcaBIOPATHList(lls)

### Arguments

`lls` | an Entrez gene IDs vector

### Details

The given gene IDs should be Entrez gene IDs. And the return list also only contains Entrez gene IDs besides caBIO pathway IDs.

### Value

return an Entrez genes ID list, names of the list are caBIO pahtway IDs and elements are Entrez gene IDs.

### Author(s)

Gang Feng, Pan Du and Simon Lin

### References

Feng, G., Du, P., Krett, N., Tessel, M., Rosen, S., Kibbe, W.A. and Lin, S.M., 'A collection of bioconductor methods to visualize gene-list annotations', BMC Research Notes 2010, 3:10

### See Also

`getCategoryList`

### Examples

    ## Not run: a <- getcaBIOPATHList('1647')
    ## Not run: length(a)

[Package GeneAnswers version 2.22.0 Index]