exportClusters {wavClusteR} | R Documentation

## Export clusters as BED track

### Description

Export clusters as BED track, compatible with the UCSC genome browser

### Usage

    exportClusters(clusters, filename = 'wavClusters.bed', trackname =
    'wavClusters', description = 'wavClusters')

### Arguments

`clusters` | GRanges object containing individual clusters as identified by the filterClusters function
`filename` | A character defining the BED file name. Default to "wavClusters.bed"
`trackname` | A character defining the track.name of the BED file. Default to "wavClusters"
`description` | A character defining the description of the BED file. Default to "wavClusters"

### Value

A BED file of the exported GRanges object

### Note

Clusters are color coded according to their strand information (red for the plus strand, blue for the minus strand).

### Author(s)

Federico Comoglio

### See Also

`filterClusters`

[Package wavClusteR version 2.12.1 Index]