got {wateRmelon} | R Documentation

## Internal functions for Illumina i450 normalization functions

### Description

got and fot find the annotation column differentiating type I and type II assays in MethylSet (got) or MethyLumiSet (fot) objects. pop extracts columns from IlluminaHumanMethylation450k.db

### Usage

    got(obj)
    fot(x)

### Arguments

`x` | a MethyLumiSet
`obj` | a MethylSet

### Details

`got` returns a character vector of 'I' and 'II', `fot` returns the index of the relevant column. `pop` returns a data frame

### Author(s)

Leonard.Schalkwyk@kcl.ac.uk

### References

Pidsley R, Wong CCY, Volta M, Lunnon K, Mill J, Schalkwyk LC: A data-driven approach to preprocessing Illumina 450K methylation array data (submitted)

[Package wateRmelon version 1.22.1 Index]