CHANGES IN VERSION 2.6.1
------------------------
- Fix failing partOf unit test <2017-11-27 Mon>

CHANGES IN VERSION 2.6.0
------------------------
- Bioconductor release 3.6


CHANGES IN VERSION 2.5.6
------------------------
- bump version 

CHANGES IN VERSION 2.5.5
------------------------
- Fix failing test do to different order <2017-10-23 Mon>

CHANGES IN VERSION 2.5.4
------------------------
- Fix bug in pagesize limit when reporting children, ancestors,
  ... (see issue #25) <2017-10-17 Tue>

CHANGES IN VERSION 2.5.4
------------------------
- New term(s) to data.frame coersion methods <2017-10-14 Sat>

CHANGES IN VERSION 2.5.3
------------------------
- Add import Ontology in NAMESPACE 

CHANGES IN VERSION 2.5.2
------------------------
- Update to latest BiocStyle <2017-09-01 Fri>
- Quick fix for issue #24 (reported upsteams) <2017-09-02 Sat>
- Use Ontology generic from BiocGenerics <2017-09-03 Sun>

CHANGES IN VERSION 2.5.1
------------------------
- Fix unit test <2017-06-20 Tue>

CHANGES IN VERSION 2.5.0
------------------------
- Bioconductor devel 3.6


CHANGES IN VERSION 2.4.0
------------------------
- Bioconductor release 3.5


CHANGES IN VERSION 2.3.5
------------------------

- Fix failing test <2017-03-15 Wed>

CHANGES IN VERSION 2.3.4
------------------------

- Ammend failing Ontologies unit test (related to changes made in
  version 2.3.3: the GO name reverted back to Gene Ontolgy)
  <2017-01-11 Wed>

CHANGES IN VERSION 2.3.3
------------------------

- Add ctb to Authors@R <2016-12-28 Wed>
- use NEWS.md <2016-12-28 Wed>
- Ammend failing Ontologies unit test <2017-01-02 Mon>
 
CHANGES IN VERSION 2.3.2
------------------------

- Update test to reflect GO's new title <2016-12-21 Wed>
 
CHANGES IN VERSION 2.3.1
------------------------

- Fix failing unit test <2016-11-22 Tue>

CHANGES IN VERSION 2.3.0
------------------------

- Bioconductor devel 3.5


CHANGES IN VERSION 2.2.0
------------------------

- Bioconductor release 3.4
 
CHANGES IN VERSION 2.1.3
------------------------

- Fix failing tests <2016-09-16 Fri>
 

CHANGES IN VERSION 1.99.1
-------------------------

- Explicitly extract raw content to fix error <2016-04-02 Sat>
 
CHANGES IN VERSION 1.99.0
-------------------------

- Using the REST API 
 

CHANGES IN VERSION 1.13.1
-------------------------

- Package deprecation message <2015-12-30 Wed>
 
CHANGES IN VERSION 1.13.0
-------------------------

- Bioc devel 3.3


CHANGES IN VERSION 1.12.0
-------------------------

- Bio release 3.2


CHANGES IN VERSION 1.11.6
-------------------------

- fix failing unit tests <2015-07-02 Thu>
 
CHANGES IN VERSION 1.11.5
-------------------------

- add test script <2015-06-30 Tue>
- more unit tests <2015-06-30 Tue>

CHANGES IN VERSION 1.11.4
-------------------------

- Fix bug in as("[MS, MS:123, ]", "CVParam") and add unit test
   <2015-06-19 Fri>

CHANGES IN VERSION 1.11.3
-------------------------

- New charIsCVParam function to check if a character represents a
   valid CV param <2015-06-16 Tue>
 
CHANGES IN VERSION 1.11.2
-------------------------

- Unit test <2015-06-15 Mon>
 
CHANGES IN VERSION 1.11.1
-------------------------

- New char to CVParam coerce method <2015-06-15 Mon>


CHANGES IN VERSION 1.11.0
-------------------------

- Bioc devel 3.2

CHANGES IN VERSION 1.10.0
-------------------------

- Bioc release 3.1


CHANGES IN VERSION 1.7.2
------------------------

- Removing (temporarily) allIds("GO")) example as currently returns
   illegal message to fix testing error [2014-10-07 Tue]
- Updating roxygem inline docs to fix errors in generated Rds
   [2014-10-07 Tue]

CHANGES IN VERSION 1.7.1
------------------------

- add utils to Imports [2014-04-28 Mon]

CHANGES IN VERSION 1.7.0
------------------------

- new devel, Bioc 3.0


CHANGES IN VERSION 1.6.0
------------------------

- release for Bioc 2.14


CHANGES IN VERSION 1.5.2
------------------------

- pretty printing with strwrap(mtd[...]) in vignette and termMetadata
   S3 printing method for readable-utput (suggestion from Martin
   Morgan) [2014-02-18 Tue]
- Using BiocStyle vignette [2014-02-18 Tue]

CHANGES IN VERSION 1.5.1
------------------------

- split go terms (PRO:...) instead-f ids (PR:...) in vignette
   tgnqueryShow chunk <2013-10-19 Sat>

CHANGES IN VERSION 1.5.0
------------------------

- new devel for Bioc 2.14


CHANGES IN VERSION 1.3.2
------------------------

- fixed bug in isIdObsolete, reported by Alex Thomas <2013-07-27 Sat>

CHANGES IN VERSION 1.3.1
------------------------

--ther example in CVParam-class example, as PSI-ntology is not
   available <2013-05-02 Thu>

Changes IN VERSION 1.3.0

- Bioc 2.13 devel version bump


CHANGES IN VERSION 1.2.0
------------------------

- Bioc 2.12 stable version bump


CHANGES IN VERSION 1.1.6
------------------------

- Using knitr as VignetteEngine and visual tweaking <2013-02-17 Sun>

CHANGES IN VERSION 1.1.5
------------------------

- update vignette for knitr 1.0 compatibility, 
   based-n Dan's updates in stable version <2013-01-15 Tue>

CHANGES IN VERSION 1.1.4
------------------------

- changed query to avoid failure (see issue #6) <2012-12-26 Wed>
- added missing space in `Empty query results after 3attempts` <2012-12-26 Wed>

CHANGES IN VERSION 1.1.3
------------------------

- updated-lsQuery example <2012-12-25 Tue>

CHANGES IN VERSION 1.1.2
------------------------

- .rolsEnv now has emptyenv() as parent <2012-10-31 Wed>

CHANGES IN VERSION 1.1.1
------------------------

- fixing vignette <2012-10-02 Tue>
- new iface <2012-10-02 Tue>

CHANGES IN VERSION 1.1.0
------------------------

- version bump for next devel <2012-10-01 Mon>


CHANGES IN VERSION 0.99.12
--------------------------

o updated README.md (for github) and .Rbuildignore <2012-09-19 Wed>

CHANGES IN VERSION 0.99.11
--------------------------

o updated biocViews <2012-09-18 Tue>

CHANGES IN VERSION 0.99.10
--------------------------

o using knitr instead-f pgfSweave <2012-08-13 Mon>

CHANGES IN VERSION 0.99.9
-------------------------

- fixed-lsQuery issued warning when missing(ontologyNames)
   irrespective-f extact <2012-05-22 Tue>

CHANGES IN VERSION 0.99.8
-------------------------

- really using pdfSweave <2012-05-18 Fri>

CHANGES IN VERSION 0.99.7
-------------------------

- using pdfSweave <2012-05-16 Wed>
- changed VignetteIndexEntry <2012-05-16 Wed>
- removed roxygen2 from Suggests <2012-05-16 Wed>
- added README file describinh Rd generation 
   with roxygen2 <2012-05-16 Wed>

CHANGES IN VERSION 0.99.6
-------------------------

- implementing Mark Carlson's suggestions
- (Temporarily) removing pgf  <2012-05-15 Tue>
- added Collate field <2012-05-15 Tue>
- moving generics and class definitions to 
   AllGenerics.R and AllClasses.R <2012-05-15 Tue>
--lsQuery now repeats query 'n' times if reply 
   is empty - see man page for a brief 
   discussion <2012-05-15 Tue>
- updated vignette to discuss-ff/on-line data 
   access <2012-05-15 Tue>

CHANGES IN VERSION 0.99.5
-------------------------

- downgraded SSOAP dependency to (>= 0.8.0), as later 
   SSOAP versions are not available through biocLite 
   (due to check errors). rols works with SSOAP 0.8.0 
   and XMLSchema 0.7.2. <2012-05-11 Fri>

CHANGES IN VERSION 0.99.4
-------------------------

- added url to DESCRIPTION <2012-05-11 Fri>
- released CVParam validity contrains: now CVParam name 
   must match term-r any synonym <2012-05-11 Fri>
- new CVParam constructor <2012-05-11 Fri>

CHANGES IN VERSION 0.99.3
-------------------------

- minor vignette update <2012-05-04 Fri>
- new CVParam class <2012-05-08 Tue>
- More verbose CVParam validity error msg <2012-05-08 Tue>
- new 'rep' method for CVParam <2012-05-09 Wed>

CHANGES IN VERSION 0.99.2
-------------------------

--lsQuery has a new 'exact' parameter <2012-05-04 Fri>

CHANGES IN VERSION 0.99.1
-------------------------

- import(XMLSchema) to remove warning at startup <2012-05-04 Fri>

CHANGES IN VERSION 0.99.0
-------------------------

- vignette update <2012-04-30 Mon>
- added GO.db to Suggests for vignette <2012-04-30 Mon>
- bumped version to 0.99 for Bioc submission <2012-04-30 Mon>


CHANGES IN VERSION 0.2.2
------------------------

- added a vignette <2011-12-18 Sun>
- added xtable in suggests for vignette <2011-12-18 Sun>
- added parents() and childrenRelations() query functions <2011-12-18 Sun>

CHANGES IN VERSION 0.2.1
------------------------

- added specific SSOAP and XMLSchema version 
   requirements <2011-12-18 Sun>
- fixed a couple-f typos <2011-12-18 Sun>

CHANGES IN VERSION 0.2.0
------------------------

- initial release

