0629a3579bb296d7516a928a88608b89 *DESCRIPTION
b57f1f87aaa983fa238ab1a4c1216bf7 *INDEX
3fc18769541402ae6dd6316b5b3ad8fb *Meta/Rd.rds
846552d28084df0e8ca0047fc2c850a9 *Meta/data.rds
7f532e677b399de99b8ca9453103405a *Meta/features.rds
5ec64b96c00a418af154085c5840db7c *Meta/hsearch.rds
6723545e789b3c7da5eb4d69946dbb79 *Meta/links.rds
07c7a150919ac93d8ddd4194eda8e30d *Meta/nsInfo.rds
bd5e78b218b7acb12d51af81dea41389 *Meta/package.rds
77ca1ec84bc44ccaadc6b438846d9fb1 *NAMESPACE
594c0d4f02b79551b089be17d3c83296 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/pwOmics
297fd6db7c109c5276c15ff2e4027697 *R/pwOmics.rdb
a2085a540f9c594f20f6204000b6d145 *R/pwOmics.rdx
62f1951990e4a48b8e9576a63de2a20d *data/OmicsExampleData.RData
0173a6340a384e4863487ec72a92f25c *extdata/Genelists/Genelist_biocarta.RData
8ce73f94923b113e1b37341189cc1fa5 *extdata/Genelists/Genelist_kegg.RData
3966ca5db8518cdf31378969a73c53e7 *extdata/Genelists/Genelist_nci.RData
9f57a879f9965936a1ae43478a963a13 *extdata/Genelists/Genelist_reactome.RData
8212a0c9e1ddcbd8edbc9037b606eca5 *extdata/TF_targets.txt
98b206046ac2e5a7723f5b450b628003 *extdata/chea-background.csv
e179e6d1de61e0f377aef5c587e79401 *extdata/mat_phospho.csv
cbff0dfb526df4226b5903b7443c06f6 *extdata/phospho_anno.txt
1bfd415c150f248004e280346bdcd2fc *extdata/phospho_reg_table.txt
52bfb1275c60a7e2e3b2bbbb1bb348fd *extdata/transcriptome_signif.txt
c0a168a7153f25de41757b7fd6b64472 *help/AnIndex
aad93dc89b22abe235b0fcaa386f887a *help/aliases.rds
e286f67938080e0aa04b103a95fbc85b *help/paths.rds
e3b60d0fa4894e0060b4ab93d40e2ea6 *help/pwOmics.rdb
5b30742dcdb308d29bbffa9c17da12cc *help/pwOmics.rdx
5538fe20516c9e330987c303effb6cd5 *html/00Index.html
23336cbcefe3a469c14739cc12ebf2b5 *html/OmicsExampleData.html
a1ef480b98e0fb6ab624dfd072ac5f93 *html/PWidentallprots.html
b7e234bd8a43d89ef9ed60af8b4dd903 *html/PWidentallprotssub.html
46faf0b2baba7446d836daec4c0b3368 *html/PWidenttps.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
f1540c0bf73ebee7b62ee6aa0ff730fb *html/SteinerTree_cons.html
cb734648316db8171a8f3330226528b7 *html/TFidentallgenes.html
31ffbe30a878185d35719d356eb85c71 *html/TFidenttps.html
ecb719b41c5c5021b97507f453301b80 *html/addFeedbackLoops.html
0043c6e7c87edf40e6806a0a49abcbf3 *html/clusterTimeProfiles.html
19e8951e19b2840ed8049b2e9fd960e3 *html/consDynamicNet.html
5d5dee68a78f6a160d39b4d9fe8ee2e8 *html/createBiopaxnew.html
2e8fe465b6b7b6e46646032479d75618 *html/createIntIDs.html
57669fb51b2d243452b58d43ac0249ec *html/findSignalingAxes.html
5c28597a0f90da9c9c1bed4d58386059 *html/findxneighborsoverlap.html
4f05da1632490b03bdcee09e7c343fbb *html/findxnextneighbors.html
15229b58261085944a249e34bcb3e824 *html/genGenelists.html
112d199a79a03a6050a0aa131a4f22b8 *html/genGenelistssub.html
ed893bbfd34dda1b86cc590e754917b8 *html/genIntIDs.html
db34617f3c0ac431b7ccb91d92a4e7ac *html/generate_DSSignalingBase.html
18fe541b609d44b1d9b1080571c9dd90 *html/genfullConsensusGraph.html
833bad8e482aba94e467ce9a135aa39e *html/getAlias_Ensemble.html
a495dd93b8996d2dba380369271e910c *html/getAliasfromSTRINGIDs.html
c2af8c1825b811a8bf9006d7fdd75f2c *html/getBiopaxModel.html
12cfd329384156fb29bfa6993313625f *html/getConsensusSTRINGIDs.html
07e19aef143a687f4adc42c702d8352b *html/getDS_PWs.html
f413b969a5e631ac01b06e70497b6103 *html/getDS_TFs.html
49f184a9a385e727e464c0c77328a6d2 *html/getDS_TGs.html
c33a3891719838725a10804bed27eedc *html/getFCsplines.html
b467cb560cbffd9a3d3d4b21b8341cbd *html/getGenesIntersection.html
2f1419810d1d26361c545dc0b34a6ea8 *html/getOmicsDataset.html
a0aa0076790d0806fdde3848455867f6 *html/getOmicsTimepoints.html
7778fa4fb4393d9cc952b6731e504e30 *html/getOmicsallGeneIDs.html
3fe279451301100f49bdad6466027fa5 *html/getOmicsallProteinIDs.html
e1b34ea3fd2838b54ca159bf011d8e6c *html/getProteinIntersection.html
5d57abcec4a760a4ca97fafbcd0ee905 *html/getSTRING_graph.html
c8884ca129303f97e534217576133e79 *html/getTFIntersection.html
9de55d4bd568741f02d8ad3e17815971 *html/getUS_PWs.html
98ab681d3d0ae08ade13a4f0a6abdcfb *html/getUS_TFs.html
4ee0e7f3b419d23b8b9dd4ac62c411c1 *html/getUS_regulators.html
e51af8a596cff1c3a474d400d34964f4 *html/get_matching_transcripts.html
23f3b92f9a13be88d891952a0b79503c *html/getbipartitegraphInfo.html
72715d639a096db377fdbd43405f18b7 *html/gettpIntersection.html
b01cf5b8a69f8ba10c6125d044cc9a2c *html/identPWsofTFs.html
618f554869eb1aab82fd1c23698cf5a6 *html/identRegulators.html
26c455be34a859e08b99b744badd9113 *html/identTFTGsinPWs.html
13f0c4c4530262df97cb08d0b6278294 *html/identTFs.html
f3511b176bac75798a2310ab0526ba92 *html/identifyPR.html
ac4be9c9bff92eba2e0b1976ca100856 *html/identifyPWTFTGs.html
bba67dacf33206d916eeca30545308a4 *html/identifyPWs.html
c390c9416462b291e0d10858417b9e5c *html/identifyRsofTFs.html
ba2251a3aaf4a6f732bdc8affe8ee187 *html/identifyTFs.html
0cf753a922bb3a52476957a7a31cc301 *html/infoConsensusGraph.html
cb41a9692ca70252b2257af74a4063eb *html/loadGenelists.html
2e2af34d38a7702cc81de94d13f4c0ff *html/loadPWs.html
07f9244af336e3540c945c9894679f13 *html/plotConsDynNet.html
0df6d7c47e2359638de6df96982442fc *html/plotConsensusGraph.html
630c624997be6041bb0619d06ea66121 *html/plotConsensusProfiles.html
02bd7ce81cb18ed72c021665748bdc4f *html/plotTimeProfileClusters.html
dd7e4107061bf439e186f984046d0897 *html/predictFCvals.html
dcf01f7e2c1e885c2b8ffbb82c913e80 *html/preparePWinfo.html
bfbdb24716e7d65d114b8b86980b7e02 *html/print.OmicsData.html
892557a0b13a62493cf4dec774e0127a *html/pwIntOmics-package.html
4bac47b065ec051567eaa09ab4b40867 *html/readOmics.html
5e3d8d4f680906a2d694a620c1c68678 *html/readPWdata.html
6dbdbd8d2466c30aed4a1f95e6f73408 *html/readPhosphodata.html
ac43a722e864a67b04db6eaed64d2124 *html/readTFdata.html
f2e82dba984c818a2defff04cc7e82e2 *html/readTFtargets.html
c44f613790a9a7713c1ca8c279b57e76 *html/selectPWsofTFs.html
855c40c5fc7ef2ff51f70c64e99f8cad *html/staticConsensusNet.html
3665dc3efb14624185d1cd07fb210337 *html/temp_correlations.html
122cc06fcca219f21a1377b9d567c51e *unitTests/provided_TF_genes.txt
ecdaa851b286ef5c57d39631fabf5bcb *unitTests/pwIntOmics_exported.R
fe0a87544ccf51eb8843918e086046c7 *unitTests/pwIntOmics_internal.R
