c,CyData-method	cyData-subset
cbind,CyData-method	cyData-subset
cellAssignments	cyData-getset
cellAssignments,CyData-method	cyData-getset
cellAssignments<-	cyData-getset
cellAssignments<-,CyData-method	cyData-getset
cellData	cyData-getset
cellData,CyData-method	cyData-getset
cellData<-	cyData-getset
cellData<-,CyData-method	cyData-getset
cellIntensities	cyData-getset
cellIntensities,CyData-method	cyData-getset
cellIntensities<-	cyData-getset
cellIntensities<-,CyData-method	cyData-getset
countCells	countCells
CyData	cyData-class
CyData-class	cyData-class
diffIntDistr	diffIntDistr
dnaGate	dnaGate
expandRadius	expandRadius
findFirstSphere	findFirstSphere
intensities	cyData-getset
intensities,CyData-method	cyData-getset
intensities<-	cyData-getset
intensities<-,CyData-method	cyData-getset
intensityRanges	intensityRanges
interpretSpheres	interpretSpheres
labelSpheres	labelSpheres
markerData	cyData-getset
markerData,CyData-method	cyData-getset
markerData<-	cyData-getset
markerData<-,CyData-method	cyData-getset
markernames	cyData-getset
markernames,CyData-method	cyData-getset
markernames<-	cyData-getset
markernames<-,CyData,ANY-method	cyData-getset
markernames<-,CyData-method	cyData-getset
medIntensities	medIntensities
multiIntHist	multiIntHist
ncells	cyData-getset
ncells,CyData-method	cyData-getset
neighborDistances	neighborDistances
nmarkers	cyData-getset
nmarkers,CyData-method	cyData-getset
normalizeBatch	normalizeBatch
outlierGate	outlierGate
packIndices	packIndices
pickBestMarkers	pickBestMarkers
plotCellIntensity	plotCells
plotCellLogFC	plotCells
poolCells	poolCells
prepareCellData	prepareCellData
rbind,CyData-method	cyData-subset
recountCells	recountCells
sampleNames	cyData-getset
sampleNames,CyData-method	cyData-getset
sampleNames<-	cyData-getset
sampleNames<-,CyData,ANY-method	cyData-getset
sampleNames<-,CyData-method	cyData-getset
show,CyData-method	cyData-class
spatialFDR	spatialFDR
subset,CyData-method	cyData-subset
unpackIndices	packIndices
[,CyData,ANY,ANY,ANY-method	cyData-subset
[,CyData,ANY,ANY-method	cyData-subset
[,CyData,ANY-method	cyData-subset
[<-,CyData,ANY,ANY,CyData-method	cyData-subset
