# Survival analysis using transcriptional networks inferred by the RTN package

## Documentation for package ‘RTNsurvival’ version 1.2.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Package NEWS.

## Help Pages

RTNsurvival-package | Performs survival analysis using transcriptional networks inferred by the RTN package.
dualCoxTable | Cox regression analysis for dual regulons
dualSurvivalPanel | Panel plot of regulons in a inferred dual
dualSurvivalPanel-method | Panel plot of regulons in a inferred dual
RTNsurvival | Performs survival analysis using transcriptional networks inferred by the RTN package.
survival.data | A pre-processed dataset for demonstration purposes only.
TNS | TNS: An S4 class for survival survival analysis using transcriptional networks inferred by the RTN package.
TNS-class | TNS: An S4 class for survival survival analysis using transcriptional networks inferred by the RTN package.
tnsCox | Cox regression analysis for TNS class objects.
tnsCox-method | Cox regression analysis for TNS class objects.
tnsGet | Get information from slots in a TNS object
tnsGet-method | Get information from slots in a TNS object
tnsGSEA2 | 2-tailed Gene Set Enrichment Analysis on Transcriptional Networks.
tnsGSEA2-method | 2-tailed Gene Set Enrichment Analysis on Transcriptional Networks.
tnsKM | Kaplan-Meier analysis for TNS class objects.
tnsKM-method | Kaplan-Meier analysis for TNS class objects.
tnsPlotGSEA2 | Plot 2-tailed GSEA for a sample from a TNS
tnsPreprocess | Preprocessing of TNS class objects.
tnsPreprocess-method | Preprocessing of TNS class objects.