fDataAmp {R453Plus1Toolbox} | R Documentation

## Access the amplicon data of an AVASet.

### Description

Similar to `fData` of the Biobase ExpressionSet, this function returns the feature data of the amplicon slot of an instance of the AVASet.

### Usage

        fDataAmp(object)

### Arguments

`object` | An `link{AVASet-class}` object.

### Value

The feature data of the amplicon slot contains the names, primers, start/end positions and reference sequences of all amplicons (see`AVASet-class` for details). It returns a data frame.

### Author(s)

Christoph Bartenhagen

### See Also

`featureDataAmp`, `assayDataAmp`,`AVASet-class`

### Examples

        # load an AVA dataset containing 6 samples, 4 amplicons and 259 variants
        data(avaSetExample)
        avaSetExample

        # show contents amplicon feature data
        fDataAmp(avaSetExample)

[Package R453Plus1Toolbox version 1.28.1 Index]