bindist-class {ChIPpeakAnno} | R Documentation

## Class `"bindist"`

### Description

An object of class `"bindist"` represents the relevant fixed-width range of binding site from the feature and number of possible binding site in each range.

### Objects from the Class

Objects can be created by calls of the form `new("bindist", counts="integer", mids="integer", halfBinSize="integer", bindingType="character", featureType="character")`.

### Slots

`counts`

  vector of `"integer"` The count number in each binding range

`mids`

  vector of `"integer"` The center of each range relevant to feature

`halfBinSize`

  `"integer"`, length must be 1. the fixed half-width of each binding range

`bindingType`

  a `"character"`. could be "TSS", "geneEnd"

`featureType`

  a `"character"`. could be "transcript", "exon"

### Methods

$, $<-

  Get or set the slot of `bindist`

### See Also

preparePool, peakPermTest

[Package ChIPpeakAnno version 3.12.7 Index]