Package: karyoploteR
Type: Package
Title: Plot customizable linear genomes displaying arbitrary data
Version: 1.2.2
Date: 2017-05-03
Author: Bernat Gel <bgel@igtp.cat>
Maintainer: Bernat Gel <bgel@igtp.cat>
Description: karyoploteR creates karyotype plots of arbitrary genomes and offers
    a complete set of functions to plot arbitrary data on them. It mimicks many
    R base graphics functions coupling them with a coordinate change function 
    automatically mapping the chromosome and data coordinates into the plot 
    coordinates. In addition to the provided data plotting functions, it is 
    easy to add new ones.
License: Artistic-2.0
Depends: R (>= 3.4), regioneR, GenomicRanges, methods
Imports: regioneR, GenomicRanges, Rsamtools, stats, graphics, memoise,
        rtracklayer, GenomeInfoDb, S4Vectors, biovizBase, digest,
        bezier
Suggests: BiocStyle, knitr, testthat, magrittr,
        BSgenome.Hsapiens.UCSC.hg19, pasillaBamSubset
VignetteBuilder: knitr
biocViews: Visualization, CopyNumberVariation, Sequencing, Coverage,
        DNASeq, ChIPSeq, MethylSeq, DataImport
NeedsCompilation: no
RoxygenNote: 6.0.1
Packaged: 2017-10-07 01:28:11 UTC; biocbuild
Built: R 3.4.1; ; 2017-10-07 05:00:31 UTC; windows
