7891ce5342274d0d65ee08ec20dda6a3 *DESCRIPTION
a13be86476eee14fcc6abc07345b4601 *INDEX
1f709b7931bba35f766e9929af181ec4 *Meta/Rd.rds
fc290e85565a8295d42ea4e32e0cc0ef *Meta/data.rds
3116b09a69f681bcdc57557b4c235db7 *Meta/features.rds
f1e4b116e07aa7a47e99c0dadbaca0a9 *Meta/hsearch.rds
eb5d6475269a63cf5522d12be641329a *Meta/links.rds
df11fb74c661d3e98d957de3f1ec7354 *Meta/nsInfo.rds
8e3ee24252d006e2dd5fca77068756c3 *Meta/package.rds
9a5147111e918f04280a11a20687feac *Meta/vignette.rds
c40260a1ee535f524492e423147ecd6f *NAMESPACE
d137c11efe8daa3b0ae478ba5ad84335 *NEWS
ebf0fc819595d631b8bf280c4b049940 *R/TPP
dfddf75678c6d923cdefcb29e474b29a *R/TPP.rdb
5feb8d138ddc91638047e1f130c42143 *R/TPP.rdx
8f9f2358409273ebc5c5d4ac78edbcc8 *data/TPPTR_reference_results_HepG2.RData
ae998c0fe9447fbe1ff3b833a9506bba *data/datalist
3b2e7f58a451bafc144053e0cf4a7083 *data/hdacCCR_smallExample.RData
f8b1baab71c2edb5c204a0d2da38f7d5 *data/hdacTR_resultsTable_smallExample.RData
b3013f12ee19b16668f58c7d5f875928 *data/hdacTR_smallExample.RData
dc278f421f5ae48596b6f289e32a2901 *data/panobinostat_2DTPP_smallExample.RData
8020d0b75f9f03f04b75d6b4c1e7e32c *doc/NPARC_analysis_of_TPP_TR_data.R
fa7fd85774a25029ae2290acaaf106f3 *doc/NPARC_analysis_of_TPP_TR_data.Rnw
d8d7025d12ff70d38903b74d78bdb472 *doc/NPARC_analysis_of_TPP_TR_data.pdf
d57040c3d197ae9d48f62ed623dbc324 *doc/TPP_introduction_1D.R
6650d899ca01ba6f79883908ca8fd161 *doc/TPP_introduction_1D.Rnw
f2cf01a0c3091156f6041af36d3ffbe6 *doc/TPP_introduction_1D.pdf
d788bdab21b4d8c7c65c2ab8a6e50444 *doc/TPP_introduction_2D.R
61cad46fff9bacc14edae3d8d7d45e81 *doc/TPP_introduction_2D.Rnw
41f4d6dce090884b475837be49b7d61b *doc/TPP_introduction_2D.pdf
3f4d5be39f160cc692fb594ac071478c *doc/index.html
47d6dcf6728d567fa8dff94846cf7146 *example_data/2D_example_data/PFC_39093_PF1_QV1_P0101918C.txt
49936bd44f6f198204a1a969082d9a56 *example_data/2D_example_data/PFC_39099_PF1_QV1_P0101908C.txt
36404d1fb410c4c8fd29d7cd73180527 *example_data/2D_example_data/PFC_39101_PF1_QV1_P0101898C.txt
bd6aa3e7c9e0e1b15883f40e4ac9ca2b *example_data/2D_example_data/PFC_39106_PF1_QV1_P0101868C.txt
72a3931b1e3fe02ba254fb369357e571 *example_data/2D_example_data/PFC_39108_PF1_QV1_P0101878C.txt
b18d4d236187e0d929cc837585bcca94 *example_data/2D_example_data/PFC_39110_PF1_QV1_P0101888C.txt
69ae5a1fbc257b00456c2d9dbd5d6768 *example_data/2D_example_data/Panobinostat_TPP-2D_config.xlsx
c4df4f396442f81fd1987e0ab9a85fc7 *example_data/2D_example_data/fractAbundInData.RData
b9f231613961d258afe24bcc7472c54b *example_data/2D_example_data/referenceNormData.RData
7ac1093552eaf281576d5f20e605e5d6 *example_data/2D_example_data/shortCCRresults.RData
bdaf865b9856729c2084de6081e72521 *example_data/2D_example_data/shortData2d.RData
f4d14590fe21a76f30fa18c3e5889ee7 *example_data/CCR_example_data/Panobinostat_TPP-CCR_config.xlsx
5e0f32079fbfa4b4e7ffcb5aec39c4e4 *example_data/CCR_example_data/panobinostat_1_merged_results_20150227_1017_proteins.txt
d41ccfe4fb92d18ac9daeecc1db7bf19 *example_data/CCR_example_data/panobinostat_2_merged_results_20150227_1110_proteins.txt
9354d118e09492f93f7b8bc8d1ca861d *example_data/TR_example_data/Panobinostat_TPP-TR_config.xlsx
0c67cbada22f6f71a009961f3e5b4358 *example_data/TR_example_data/panobinostat_1_merged_results_20150226_1013_proteins.txt
16b1e70d2e5c17c3bd55f0c9604a0683 *example_data/TR_example_data/panobinostat_2_merged_results_20150226_1139_proteins.txt
b829591e84c8a081a4d4ccb6b6862b7a *example_data/TR_example_data/vehicle_1_merged_results_20150227_0908_proteins.txt
fb36f922b446d48f649597a371ebdd62 *example_data/TR_example_data/vehicle_2_merged_results_20150227_0847_proteins.txt
1256b0a8d12397ba0a6e1ba06829eef6 *extdata/randomESet.Rdata
e5dfe3c3cf805dab702697c1d69a5acf *extdata/validationData_meltCurveFilter.Rdata
ac65d119549f18e6a29ef490492f7833 *extdata/validationData_pvalBinning.Rdata
5780f9c0ddd0e6bd267e6d7bc4a02c34 *extdata/validationData_pvalComputation.Rdata
cd73bfaf387450d7a0a635936d19c438 *help/AnIndex
cdd6f808820c5a4562e8da496ff641be *help/TPP.rdb
3a6cb358e6cf443eb5f0ff6904d88a4e *help/TPP.rdx
9f674d35164c7b0eaebe4b8829d889eb *help/aliases.rds
680ec9c87edef536884ddb2f8e6c975c *help/paths.rds
86fed8a434621262a0aa4b5ea6a171c2 *html/00Index.html
b6763e6916890c631fdc3f2643803b1a *html/R.css
34cf6463786c086fbdc26258775f4226 *test_data/Panobinostat_2DTPP_smallExample.R
dc278f421f5ae48596b6f289e32a2901 *test_data/panobinostat_2DTPP_smallExample.RData
32427e8533075fe7a32b238cbe30c6a6 *test_data/panobinostat_2D_fcResults.rds
21d5b630e163b043c02b60c3f5d2ad15 *test_data/panobinostat_2D_fcResults2.rds
b3d7fd094076872739b8d107d295fdc7 *test_data/panobinostat_2D_fitResults.rds
bbcb9c667cff575d2fe212aeca32809e *test_data/panobinostat_2D_fitResults2.rds
5c5e358c5fb3558f39dd004465c0f744 *test_data/panobinostat_2D_fitResults3.rds
020b7cb8b6fcdd5d66709139d2f962e4 *test_data/panobinostat_2D_importResults.rds
9e1a158df9cc2f917c293587c7369acc *test_data/panobinostat_2D_importResults2.rds
c9549a07a02d3bb7c7948ebb9a87ee64 *test_data/panobinostat_2D_normResults.rds
f43fe33c95beca4e8dd409cc38c60a02 *test_data/panobinostat_2D_normResults2.rds
3a4bc9d77bd53291f50b26d9e68df87a *test_data/panobinostat_2D_normResults3.rds
c9c7d328ba3df010cd076da9ecdb4419 *test_data/panobinostat_CCR_fitResults.rds
04b312febb661cf7e9f3ba6f022f618f *test_data/panobinostat_ex_confg.txt
77926387b04492a51eebe58ce3ae78f2 *test_data/panobinostat_ex_confg2.txt
a131fcceb128328668c30dd31027c05d *tpp2d_report.Rmd
