MIGSAPackage-package	MIGSAPackage
$,MIGSAres-method	MIGSAres-common
as.data.frame,MIGSAres	MIGSAres-common
as.data.frame,MIGSAres-method	MIGSAres-common
as.Genesets	Genesets-as.Genesets
as.Genesets,list-method	Genesets-as.Genesets
bcMigsaRes	bcMigsaRes
colnames,MIGSAres	MIGSAres-common
colnames,MIGSAres-method	MIGSAres-common
dim,MIGSAres-method	MIGSAres-common
downloadEnrichrGeneSets	Genesets-enrichr
downloadEnrichrGeneSets,ANY-method	Genesets-enrichr
downloadEnrichrGeneSets,character-method	Genesets-enrichr
enrichrGeneSets	Genesets-enrichr
enrichrGeneSets,ANY-method	Genesets-enrichr
enrichrGeneSets,character-method	Genesets-enrichr
exprData	IGSAinput-getterSetters
exprData,IGSAinput-method	IGSAinput-getterSetters
ExprData-class	ExprData-class
exprData<-	IGSAinput-getterSetters
exprData<-,IGSAinput-method	IGSAinput-getterSetters
filterByGenes	MIGSAres-genesManipulation
filterByGenes,MIGSAres,character-method	MIGSAres-genesManipulation
FitOptions	FitOptions-class
fitOptions	IGSAinput-getterSetters
fitOptions,IGSAinput-method	IGSAinput-getterSetters
FitOptions-class	FitOptions-class
FitOptions.data.frame	FitOptions-class
FitOptions.default	FitOptions-class
fitOptions<-	IGSAinput-getterSetters
fitOptions<-,IGSAinput-method	IGSAinput-getterSetters
genesBarplot	MIGSAres-plots
genesBarplot,MIGSAres-method	MIGSAres-plots
geneSetBarplot	MIGSAres-plots
geneSetBarplot,MIGSAres-method	MIGSAres-plots
Genesets-enrichr	Genesets-enrichr
geneSetsFromFile	Genesets-geneSetsFromFile
geneSetsFromFile,character-method	Genesets-geneSetsFromFile
geneSetsList	IGSAinput-getterSetters
geneSetsList,IGSAinput-method	IGSAinput-getterSetters
geneSetsList<-	IGSAinput-getterSetters
geneSetsList<-,IGSAinput-method	IGSAinput-getterSetters
genesHeatmap	MIGSAres-plots
genesHeatmap,MIGSAres-method	MIGSAres-plots
genesInSets	MIGSAres-genesManipulation
genesInSets,MIGSAres-method	MIGSAres-genesManipulation
getAdditionalInfo	MIGSAres-getAdditionalInfo
getAdditionalInfo,MIGSAres	MIGSAres-getAdditionalInfo
getAdditionalInfo,MIGSAres-method	MIGSAres-getAdditionalInfo
getDEGenes	IGSAinput-getDEGenes
getDEGenes,IGSAinput	IGSAinput-getDEGenes
getDEGenes,IGSAinput-method	IGSAinput-getDEGenes
getHeights	MIGSAres-GoAnalysis
getHeights,character-method	MIGSAres-GoAnalysis
GSEAparams	GSEAparams-class
gseaParams	IGSAinput-getterSetters
gseaParams,IGSAinput-method	IGSAinput-getterSetters
GSEAparams-class	GSEAparams-class
gseaParams<-	IGSAinput-getterSetters
gseaParams<-,IGSAinput-method	IGSAinput-getterSetters
head,MIGSAres	MIGSAres-common
head,MIGSAres-method	MIGSAres-common
IGSAinput	IGSAinput-class
IGSAinput-class	IGSAinput-class
IGSAinput-getterSetters	IGSAinput-getterSetters
loadGo	Genesets-loadGo
loadGo,character-method	Genesets-loadGo
merge,MIGSAres,MIGSAres	MIGSAres-common
merge,MIGSAres,MIGSAres-method	MIGSAres-common
MIGSA	MIGSA
MIGSA,list	MIGSA
MIGSA,list-method	MIGSA
migsaGoTree	MIGSAres-GoAnalysis
migsaGoTree,MIGSAres-method	MIGSAres-GoAnalysis
migsaHeatmap	MIGSAres-plots
migsaHeatmap,MIGSAres-method	MIGSAres-plots
MIGSAmGSZ	MIGSAmGSZ
MIGSAmGSZ,matrix,list,vector-method	MIGSAmGSZ
MIGSAPackage	MIGSAPackage
migsaRes	migsaRes
MIGSAres-class	MIGSAres-class
MIGSAres-common	MIGSAres-common
MIGSAres-genes	MIGSAres-genesManipulation
MIGSAres-GOanalysis	MIGSAres-GoAnalysis
MIGSAres-plots	MIGSAres-plots
name	IGSAinput-getterSetters
name,IGSAinput-method	IGSAinput-getterSetters
name<-	IGSAinput-getterSetters
name<-,IGSAinput-method	IGSAinput-getterSetters
SEAparams	SEAparams-class
seaParams	IGSAinput-getterSetters
seaParams,IGSAinput-method	IGSAinput-getterSetters
SEAparams-class	SEAparams-class
seaParams<-	IGSAinput-getterSetters
seaParams<-,IGSAinput-method	IGSAinput-getterSetters
setEnrCutoff	MIGSAres-setEnrCutoff
setEnrCutoff,MIGSAres,numeric-method	MIGSAres-setEnrCutoff
show,MIGSAres	MIGSAres-common
show,MIGSAres-method	MIGSAres-common
summary	summaryFunctions
summary,GSEAparams-method	summaryFunctions
summary,IGSAinput-method	summaryFunctions
summary,MIGSAres-method	summaryFunctions
summary,SEAparams-method	summaryFunctions
summary.GSEAparams	summaryFunctions
summary.IGSAinput	summaryFunctions
summary.MIGSAres	summaryFunctions
summary.SEAparams	summaryFunctions
tail,MIGSAres	MIGSAres-common
tail,MIGSAres-method	MIGSAres-common
[,MIGSAres,ANY,ANY,ANY-method	MIGSAres-common
