Package: InteractionSet
Version: 1.4.0
Date: 2017-03-24
Title: Base Classes for Storing Genomic Interaction Data
Author: Aaron Lun <alun@wehi.edu.au>, Malcolm Perry <mgperry32@gmail.com>,
        Liz Ing-Simmons <liz.ing-simmons12@csc.mrc.ac.uk> 
Maintainer: Aaron Lun <alun@wehi.edu.au>
Depends: R (>= 3.4), GenomicRanges, SummarizedExperiment (>= 1.1.6)
Imports: IRanges, S4Vectors (>= 0.13.13), GenomeInfoDb, BiocGenerics,
        methods, Matrix
Suggests: testthat, knitr, rmarkdown, BiocStyle
biocViews: Infrastructure, DataRepresentation, Software, HiC
Description: Provides the GInteractions, InteractionSet and ContactMatrix
        objects and associated methods for storing and manipulating genomic 
        interaction data from Hi-C and ChIA-PET experiments.
License: GPL-3
NeedsCompilation: yes
VignetteBuilder: knitr
Collate: AllGenerics.R AllClasses.R ContactMatrix-methods.R
        GInteractions-methods.R InteractionSet-methods.R
        GRanges-methods.R getset.R swapAnchors.R pairs.R conversion.R
        linearize.R boundingBox.R distances.R overlaps.R linkOverlaps.R
        matching.R
Packaged: 2017-04-25 01:25:02 UTC; biocbuild
Built: R 3.4.0; i386-w64-mingw32; 2017-04-25 04:57:08 UTC; windows
Archs: i386, x64
