Package: GRridge
Type: Package
Title: Better prediction by use of co-data: Adaptive group-regularized
        ridge regression
Version: 1.0.0
Date: 2016-10-25
Author: Mark A. van de Wiel <mark.vdwiel@vumc.nl>
Maintainer: Mark A. van de Wiel <mark.vdwiel@vumc.nl>
Depends: R (>= 3.3), penalized, Iso, survival, GSEABase, BiocGenerics,
        Biobase, annotate, methods, graph,stats
Suggests: testthat
Description: This package allows the use of multiple sources of co-data
        (e.g. external p-values, gene lists, annotation) to improve
        prediction of binary, continuous and survival response using
        (logistic, linear or Cox) group-regularized ridge regression.
        It also facilitates post-hoc variable selection and prediction
        diagnostics by cross-validation using ROC curves and AUC.
biocViews: Classification, Regression, Survival, Bayesian, RNASeq,
        GenePrediction, GeneExpression, Pathways, GeneSetEnrichment,
        GO, KEGG, GraphAndNetwork
License: GPL-3
LazyLoad: yes
NeedsCompilation: no
Packaged: 2017-04-25 01:44:26 UTC; biocbuild
Built: R 3.4.0; ; 2017-04-25 04:38:05 UTC; windows
