.compute_ssFC	dot-compute_ssFC
compute_perturbation_score	compute_perturbation_score
generate_permuted_scores	generate_permuted_scores
generate_permuted_scores,data.frame-method	generate_permuted_scores
generate_permuted_scores,DGEList-method	generate_permuted_scores
generate_permuted_scores,matrix-method	generate_permuted_scores
generate_permuted_scores,SummarizedExperiment-method	generate_permuted_scores
logCPM_example	logCPM_example
metadata_example	metadata_example
normalise_by_permu	normalise_by_permu
plot_gs_network	plot_gs_network
retrieve_topology	retrieve_topology
sSNAPPY	sSNAPPY
weight_ss_fc	weight_ss_fc
weight_ss_fc,data.frame-method	weight_ss_fc
weight_ss_fc,DGEList-method	weight_ss_fc
weight_ss_fc,matrix-method	weight_ss_fc
weight_ss_fc,SummarizedExperiment-method	weight_ss_fc
