Package: phemd
Type: Package
Title: Phenotypic EMD for comparison of single-cell samples
Version: 1.12.0
Authors@R: person("William S", "Chen", email="wil.yum.chen@gmail.com",role=c("aut","cre"))
Description: Package for comparing and generating a low-dimensional embedding
  of multiple single-cell samples.
License: GPL-2
Encoding: UTF-8
LazyData: true
Depends: R (>= 3.5), monocle, Seurat
Imports: SingleCellExperiment, RColorBrewer, igraph, transport, pracma,
        cluster, Rtsne, destiny, RANN, ggplot2, maptree, pheatmap,
        scatterplot3d, VGAM, methods, grDevices, graphics, stats,
        utils, cowplot, S4Vectors, BiocGenerics, SummarizedExperiment,
        Biobase, phateR, reticulate
Config/reticulate: list( packages = list( list(package = "phate") ) )
Suggests: knitr
VignetteBuilder: knitr
biocViews: Clustering, ComparativeGenomics, Proteomics,
        Transcriptomics, Sequencing, DimensionReduction, SingleCell,
        DataRepresentation, Visualization, MultipleComparison
RoxygenNote: 7.0.2
PackageStatus: Deprecated
git_url: https://git.bioconductor.org/packages/phemd
git_branch: RELEASE_3_15
git_last_commit: 2802049
git_last_commit_date: 2022-09-06
Date/Publication: 2022-09-08
NeedsCompilation: no
Packaged: 2022-09-09 00:17:40 UTC; biocbuild
Author: William S Chen [aut, cre]
Maintainer: William S Chen <wil.yum.chen@gmail.com>
Built: R 4.2.1; ; 2022-09-09 11:09:13 UTC; windows
