3afe9a617d7756fa1980b1c44b348e47 *DESCRIPTION
16ff8adea6a757532e39de215c146875 *INDEX
0d3d56b1e5fc1e1f357504ce75f7c697 *Meta/Rd.rds
f69089d1a98b5c54e1a44e7a320deacd *Meta/data.rds
9c6fc9444f1d52dca2f8e75b612d7e36 *Meta/features.rds
be5353e7b6985bd978a8438af85bf2a2 *Meta/hsearch.rds
09d013f4428c892620ae161b1d23dc45 *Meta/links.rds
52ae1e78696332c9380d929ad31b6501 *Meta/nsInfo.rds
c4a1a366a54cf6c4a858ae4a26eb0da2 *Meta/package.rds
aef174656fa858d59f1282dfe09a88d3 *Meta/vignette.rds
fa19c044feb4d374244c928849274db6 *NAMESPACE
920ea5dc716f70bc4324808bb7e5c3e7 *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/mitoClone2
28376f67db69770b7aa78e37d12fbc25 *R/mitoClone2.rdb
48ee5bf406a012bc89e39ec9941ec8eb *R/mitoClone2.rdx
b67595878937772f324efd02d235756f *R/sysdata.rdb
d6cc43e30b364f9560d1a1d573535b38 *R/sysdata.rdx
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1c453e7d35264b67e77f4cfbfb1dccb2 *SCITEpkg/README.md
60c38fa95542dc96f04a84812eb7476b *SCITEpkg/findBestTrees.cpp
24cc744163f05f56eb5c056754e016e2 *SCITEpkg/matrices.cpp
0c30d07b4f2f505c9f2873296b68b464 *SCITEpkg/matrices.h
3cdd480a0923a65989699748b882a563 *SCITEpkg/mcmc.cpp
a27737bdd825e3bf626d9d9b4bd6131e *SCITEpkg/mcmc.h
10e2ef120753d9227fc4029097a9ecf2 *SCITEpkg/mcmcBinTreeMove.cpp
92ed03d607076f8351ad238a4923e793 *SCITEpkg/mcmcBinTreeMove.h
187a3dc0b50d8d6d69a5798c8dad9a38 *SCITEpkg/mcmcTreeMove.cpp
02bfa00af6681e80acdd0d9e8d6a5997 *SCITEpkg/mcmcTreeMove.h
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2a487f9f13aacf18a6c10d5a68636348 *SCITEpkg/output.h
dae220a9427605c41d829adff55626a5 *SCITEpkg/rand.cpp
f7977efec0569ea7072ebd94edf710b8 *SCITEpkg/rand.h
274d3abd011a24aeae0f02838342c4e0 *SCITEpkg/scoreBinTree.cpp
d5c0fd453c381819d746d04a2e2728b4 *SCITEpkg/scoreBinTree.h
ab9d37be1f979babcc809c9c0017ab0f *SCITEpkg/scoreTree.cpp
6be789db89746497db22d86d1c1bd594 *SCITEpkg/scoreTree.h
fb3efad6b02e95889357e3903575c4b3 *SCITEpkg/treelist.cpp
6e55d843ff04d914068c3141c06268b4 *SCITEpkg/treelist.h
b0002b1dbf2f2e07e8fa19de18900a35 *SCITEpkg/trees.cpp
60d016269ce68fdccdd1b3e41e702717 *SCITEpkg/trees.h
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2ab3339a8be7a48ab1c39b147938b62e *data/M_P2.RData
47bc44afea9033a4ff5537ea6cdcbc70 *data/N_P1.RData
ca5a52c762e93455122542fb0812e45f *data/N_P2.RData
30cb1387557e2fd4c1c196449d1ad947 *doc/clustering.R
79c0200f3e458ba81b6c16c0f78d8961 *doc/clustering.Rmd
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1add710eb4b0351f9a66a1151c22ad8a *doc/index.html
21b34c7261c1e7cbbc15e7b65e4596a5 *doc/overview.R
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29309a44ca1933f79ff6b197c3b677e6 *extdata/LudwigFig7.Rda
b8d2e5034b419ff6463937846aa1340b *extdata/example_counts.Rda
08e89c9f01505ff6184a275e21b6ca1c *extdata/mm10_10x.bam
15c920cc46edc7d2f16b609e7db26a48 *extdata/mm10_10x.bam.bai
583c9140a54366ac9120090fa8c0667f *extdata/sample_example1.RDS
27bd2d51a3b6ed0a814f21c3c3e52515 *help/AnIndex
9e6604f0f198961c4cda02e35ffab981 *help/aliases.rds
2677d635d9e1b8086bdb5c34bf4beb56 *help/figures/logo.png
f0dd9527a51880dc731e5ee8c4ecc2ee *help/mitoClone2.rdb
5699102b8abd7abd7ed33193c2fe423d *help/mitoClone2.rdx
824ba1573b5636e1828203169de21825 *help/paths.rds
7fbb328c20bf1960d808fac56c69df26 *html/00Index.html
3845aef6126cf18c45937f292f23508c *html/R.css
a2be331afad9bc465c5cc381cd6732b7 *libs/x64/mitoClone2.dll
e99b3cf183e3d2a72c813c2b639ea583 *script/README
