76e574a4a885222ce72db19e08bd6379 *DESCRIPTION
f93c9195970d0d3a884265228e8dc18c *INDEX
a4cf07720e3c63d52bd34a0a6697b57a *LICENSE
ed2c6be0bf8fab42592c48750c628700 *Meta/Rd.rds
9c6fc9444f1d52dca2f8e75b612d7e36 *Meta/features.rds
1498a287d18155a146f17e0ab2d2182b *Meta/hsearch.rds
14a144b84a296937fe21cd65c9ed90ec *Meta/links.rds
7e6433de27d619e860de3de9db44a1b4 *Meta/nsInfo.rds
0ed7f0af7b644ea70ece33ca9a363deb *Meta/package.rds
6db785a30c01bf9948248ab148b8b604 *Meta/vignette.rds
10097d722c404fb0543932efe6f588e6 *NAMESPACE
c07a76930761297f4530785bfc5ba65d *NEWS
d6c68f1fe41ced6e98a766a3757313da *R/TraRe
c4e1be84638d29f22694ad52ab1bbc0e *R/TraRe.rdb
d5aa80c939cf136df5aeee0f7d4b7fb0 *R/TraRe.rdx
22ae7fe4fdc23efc35fd1fe1fca5370b *doc/TraRe.R
a20450ecb75a1c44bbd9a8edb39472d2 *doc/TraRe.Rmd
81aceb66101747011bf0e6a59c70b5b7 *doc/TraRe.html
aa44c62691af1977d7e66bc39f147f74 *doc/index.html
356ddb73c2ac690b9ab039f3f35df653 *extdata/ChIP/Tumor_OV50.gene_info.txt
9bf85b855c2c54457d802628362bc0ff *extdata/ChIP/Tumor_OV50.tar8855_reg638.VBSR.m100_b10.rds
2ef001e44e17a44c32c510257029bd5c *extdata/ChIP/Tumor_OV50_intersectBed.weighted_evidence.txt
031753f4bae2272b65615068845b5b02 *extdata/RewiringReport/glossary.txt
b103eb1265a62f9f6a7ebf7519891ce7 *extdata/RewiringReport/sorttable.js
2b33942bb844a1d669bdae88f14de31e *extdata/VignetteFiles/SEObject.rds
f13b015515e2503642d0196b040a047a *extdata/VignetteFiles/expression_rewiring_vignette.txt
83e71a16bdf315f5d053846489a64192 *extdata/VignetteFiles/graph_netrun_vignette.rds
93e3b1eff75aa01dfb0bae6a013fc8b7 *extdata/VignetteFiles/linker_output_vignette.rds
a4a1e736b049091c9496d183a925ac97 *extdata/expression_rewiring_example.txt
26a37cd3890484531d481fffffb3f3bd *extdata/geneinfo_rewiring_example.txt
47d268bf6ef094295acd01bd3f99bc56 *extdata/graph_netrun_example.rds
1554a508b3e1fd6ae3764b3d72b74393 *extdata/linker_phaseone_example.rds
61aec8fd4f6ece651beedebdbaa416d6 *extdata/linker_rewiring_example.rds
40879836fdc5079fdfe9c0c008958f34 *extdata/phenotype_rewiring_example.txt
dfb486d919e1243e2934a2823e03c405 *extdata/prepared_rewiring_example.rds
20a9a7f2eccb33e104acfb3c54b051e5 *extdata/refinedsumm.rds
a9aff9d3318a832c4d0409ed5f1d86a9 *extdata/targets_linker_example.rds
a22b79331afe80c209f6eade1ffd945d *extdata/tfs_linker_example.rds
bed35f7351264be724342b423b2bbec8 *extdata/tfs_linker_example_eg.rds
89773eee2416e1182769b9174cb47e65 *help/AnIndex
23ec6a7a0caae69990102f068bf3c94e *help/TraRe.rdb
dd4952db44ebc3bd36b014ad32306691 *help/TraRe.rdx
8e993dbd168ca2037695e68e25779527 *help/aliases.rds
085b8071311dd94e66099c197a5ac3ad *help/paths.rds
d31796a76e44440a06288dfd49d2c7c6 *html/00Index.html
3845aef6126cf18c45937f292f23508c *html/R.css
1fc03a6d6bc49f097ec72fcd324f3b24 *unitTests/cliquesgeneration_tests.R
0b3f2c8a8707449a27882ebc28f9a3a8 *unitTests/excel_generation_tests.R
517507c9151451db914324591a2e236a *unitTests/plot_tests.R
f6ae3fda374fb39f7b9d162189183de5 *unitTests/rewiring_tests.R
a159a0cb3beae7cec46064ffcb5f4535 *unitTests/runlinker_testindex.R
364161ce32e5fa44c00a175571b0658c *unitTests/runlinker_testmatrix.R
dfded7e72e272d813320a5d16650f1a3 *unitTests/runlinkernet_testindex.R
523c028ac6e98157363f7ea1685ee73f *unitTests/runlinkernet_testmatrix.R
