.ToxicoSet	ToxicoSet-class
annotation	ToxicoSet-accessors
annotation,ToxicoSet-method	ToxicoSet-accessors
annotation<-	ToxicoSet-accessors
annotation<-,ToxicoSet,list-method	ToxicoSet-accessors
availableTSets	availableTSets
cellInfo	ToxicoSet-accessors
cellInfo,ToxicoSet-method	ToxicoSet-accessors
cellInfo<-	ToxicoSet-accessors
cellInfo<-,ToxicoSet,data.frame-method	ToxicoSet-accessors
cellName,ToxicoSet-method	ToxicoSet-accessors
cellNames	ToxicoSet-accessors
cellNames<-	ToxicoSet-accessors
cellNames<-,ToxicoSet,list-method	ToxicoSet-accessors
checkTSetStructure	checkTSetStructure
computeAUC	computeAUC
computeIC50	computeICn
computeICn	computeICn
computeLimmaDiffExpr	computeLimmaDiffExpr
computeLimmaDiffExpr,ToxicoSet-method	computeLimmaDiffExpr-ToxicoSet-method
curation	ToxicoSet-accessors
curation,ToxicoSet-method	ToxicoSet-accessors
curation<-	ToxicoSet-accessors
curation<-,ToxicoSet,list-method	ToxicoSet-accessors
datasetType	ToxicoSet-accessors
datasetType,ToxicoSet-method	ToxicoSet-accessors
datasetType<-	ToxicoSet-accessors
datasetType<-,ToxicoSet,character-method	ToxicoSet-accessors
dateCreated	ToxicoSet-accessors
dateCreated,ToxicoSet-method	ToxicoSet-accessors
dateCreated<-	ToxicoSet-accessors
dateCreated<-,ToxicoSet,character-method	ToxicoSet-accessors
dateCreated<-,ToxicoSet-method	ToxicoSet-accessors
dim,ToxicoSet-method	dim-ToxicoSet-method
downloadTSet	downloadTSet
drugGeneResponseCurve	drugGeneResponseCurve
drugInfo	ToxicoSet-accessors
drugInfo<-	ToxicoSet-accessors
drugNames	ToxicoSet-accessors
drugNames<-	ToxicoSet-accessors
drugPerturbationSig	drugPerturbationSig
drugTimeResponseCurve	drugTimeResponseCurve
featureInfo	ToxicoSet-accessors
featureInfo,ToxicoSet-method	ToxicoSet-accessors
featureInfo<-	ToxicoSet-accessors
featureInfo<-,ToxicoSet,character,data.frame-method	ToxicoSet-accessors
featureInfo<-,ToxicoSet,character,DataFrame-method	ToxicoSet-accessors
fNames	ToxicoSet-accessors
fNames,ToxicoSet,character-method	ToxicoSet-accessors
fNames<-	ToxicoSet-accessors
fNames<-,ToxicoSet,character,character-method	ToxicoSet-accessors
geneDrugPerturbation	geneDrugPerturbation
HCC_sig	HCC_sig
logLogisticRegression	logLogisticRegression
mDataNames	ToxicoSet-accessors
mDataNames,ToxicoSet-method	ToxicoSet-accessors
mDataNames<-	ToxicoSet-accessors
mDataNames<-,ToxicoSet,ANY-method	ToxicoSet-accessors
mDataNames<-,ToxicoSet-method	ToxicoSet-accessors
molecularProfiles	ToxicoSet-accessors
molecularProfiles,ToxicoSet-method	ToxicoSet-accessors
molecularProfiles<-	ToxicoSet-accessors
molecularProfiles<-,ToxicoSet,character,character,matrix-method	ToxicoSet-accessors
molecularProfiles<-,ToxicoSet,character,missing,matrix-method	ToxicoSet-accessors
molecularProfilesSlot	ToxicoSet-accessors
molecularProfilesSlot,ToxicoSet-method	ToxicoSet-accessors
molecularProfilesSlot<-	ToxicoSet-accessors
molecularProfilesSlot<-,ToxicoSet,list-method	ToxicoSet-accessors
molecularProfilesSlot<-,ToxicoSet,list_OR_MAE-method	ToxicoSet-accessors
molecularProfilesSlot<-ToxicoSet,MultiAssayExperiment-method	ToxicoSet-accessors
moleculerProfilesSlot,ToxicoSet-method	ToxicoSet-accessors
name	ToxicoSet-accessors
name,ToxicoSet-method	ToxicoSet-accessors
name<-	ToxicoSet-accessors
name<-,ToxicoSet,character-method	ToxicoSet-accessors
name<-,ToxicoSet-method	ToxicoSet-accessors
pertNumber	ToxicoSet-accessors
pertNumber,ToxicoSet-method	ToxicoSet-accessors
pertNumber<-	ToxicoSet-accessors
pertNumber<-,ToxicoSet,array-method	ToxicoSet-accessors
phenoInfo	ToxicoSet-accessors
phenoInfo,ToxicoSet,character-method	ToxicoSet-accessors
phenoInfo<-	ToxicoSet-accessors
phenoInfo<-,ToxicoSet,character,data.frame-method	ToxicoSet-accessors
phenoInfo<-,ToxicoSet,character,DataFrame-method	ToxicoSet-accessors
sampleInfo	ToxicoSet-accessors
sampleInfo,ToxicoSet-method	ToxicoSet-accessors
sampleInfo<-	ToxicoSet-accessors
sampleInfo<-,ToxicoSet,data.frame-method	ToxicoSet-accessors
sampleName,ToxicoSet-method	ToxicoSet-accessors
sampleNames	ToxicoSet-accessors
sampleNames,ToxicoSet-method	ToxicoSet-accessors
sampleNames<-	ToxicoSet-accessors
sampleNames<-,ToxicoSet,character-method	ToxicoSet-accessors
sampleNames<-,ToxicoSet,list-method	ToxicoSet-accessors
sensitivityInfo,ToxicoSet,character-method	ToxicoSet-accessors
sensitivityInfo,ToxicoSet,missing-method	ToxicoSet-accessors
sensitivityInfo,ToxicoSet-method	ToxicoSet-accessors
sensitivityInfo<-,ToxicoSet,data.frame-method	ToxicoSet-accessors
sensitivityInfo<-,ToxicoSet,missing,data.frame-method	ToxicoSet-accessors
sensitivityMeasures,ToxicoSet-method	ToxicoSet-accessors
sensitivityMeasures<-,ToxicoSet,character-method	ToxicoSet-accessors
sensitivityProfiles,ToxicoSet-method	ToxicoSet-accessors
sensitivityProfiles<-,ToxicoSet,data.frame-method	ToxicoSet-accessors
sensitivityRaw,ToxicoSet-method	ToxicoSet-accessors
sensitivityRaw<-,ToxicoSet,array-method	ToxicoSet-accessors
sensitivitySlot	ToxicoSet-accessors
sensitivitySlot,ToxicoSet-method	ToxicoSet-accessors
sensitivitySlot<-	ToxicoSet-accessors
sensitivitySlot<-,ToxicoSet,list-method	ToxicoSet-accessors
sensitivitySlot<-,ToxicoSet,list_OR_LongTable-method	ToxicoSet-accessors
sensitivitySlot<-,ToxicoSet,LongTable-method	ToxicoSet-accessors
sensitvityInfo<-,ToxicoSet,character,data.frame-method	ToxicoSet-accessors
sensNumber	ToxicoSet-accessors
sensNumber,ToxicoSet-method	ToxicoSet-accessors
sensNumber<-	ToxicoSet-accessors
sensNumber<-,ToxicoSet,matrix-method	ToxicoSet-accessors
show,ToxicoSet-method	show-ToxicoSet-method
show,ToxicoSig-method	show-ToxicoSig-method
showSigAnnot	showSigAnnot
subsetTo	subsetTo
summarizeMolecularProfiles	summarizeMolecularProfiles
summarizeSensitivityProfiles	summarizeSensitivityProfiles
TGGATESsmall	TGGATESsmall
ToxicoSet	ToxicoSet
ToxicoSet-accessors	ToxicoSet-accessors
ToxicoSet-class	ToxicoSet-class
ToxicoSig	ToxicoSig
treatmentInfo	ToxicoSet-accessors
treatmentInfo,ToxicoSet-method	ToxicoSet-accessors
treatmentInfo<-	ToxicoSet-accessors
treatmentInfo<-,ToxicoSet,data.frame-method	ToxicoSet-accessors
treatmentNames	ToxicoSet-accessors
treatmentNames,ToxicoSet-method	ToxicoSet-accessors
treatmentNames<-	ToxicoSet-accessors
treatmentNames<-,ToxicoSet,character-method	ToxicoSet-accessors
updateObject,ToxicoSet-method	updateObject-ToxicoSet-method
[,ToxicoSet,ANY,ANY,ANY-method	sub-ToxicoSet-ANY-ANY-ANY-method
