CCDS.Hs37.3.reduced_chr1.bed
                        Example capture region file used in vignette.
IBDCheck                Sample relationship check with SeqSQC object
                        input file.
IBDRemove               Obtain the problematic sample list from IBD
                        relatedness.
Inbreeding              Sample inbreeding check with SeqSQC object
                        input file.
LoadVfile               Data preprocessing for VCF or plink input from
                        NGS or GWAS data.
MissingRate             Sample missing rate check with SeqSQC object
                        input file.
PCACheck                Population outlier check with SeqSQC object
                        input file.
RenderReport            Render the rmarkdown file for generating a
                        sample QC report.
SeqOpen                 Open the gds file in SeqSQC objects.
SeqSQC-class            A data format to store genotype phenotype and
                        sample QC results from SeqSQC.
SeqSQC-package          Sample Quality Check for NGS Data using SeqSQC
                        package
SexCheck                Sample gender check with SeqSQC object input
                        file.
example.gds             example gds file used in vignette.
example.seqfile.Rdata   Example SeqSQC file used in vignette.
example_sub.vcf         Example vcf file used in vignette.
plotQC                  Plot the QC results for specific QC steps.
problemList             Generate the problematic sample list.
sampleAnnotation.txt    Sample annotation file for the example data
                        used in vignette.
sampleQC                The wrap-up function for sample QC of
                        sequencing/GWAS data.
