# Gain and Loss Analysis of DNA

## Documentation for package ‘GLAD’ version 2.60.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.
- Code demos. Use demo() to run them.

## Help Pages

array1 | Bladder cancer CGH data
array2 | Bladder cancer CGH data
array3 | Bladder cancer CGH data
arrayCGH | Object of Class arrayCGH
arrayPersp | Perspective image of microarray spots statistic
arrayPersp.arrayCGH | Perspective image of microarray spots statistic
arrayPersp.default | Perspective image of microarray spots statistic
arrayPlot | Spatial image of microarray spots statistic
arrayPlot.arrayCGH | Spatial image of microarray spots statistic
arrayPlot.default | Spatial image of microarray spots statistic
as.data.frame.profileCGH | profileCGH consercion
as.profileCGH | Create an object of class profileCGH
as.profileCGH.data.frame | Create an object of class profileCGH
ChrNumeric | Convert chromosome into numeric values
ColorBar | Calibration bar for color images
cytoband | Cytogenetic banding
daglad | Analysis of array CGH data
daglad.profileCGH | Analysis of array CGH data
glad | Analysis of array CGH data
glad.profileCGH | Analysis of array CGH data
gm00143 | Public CGH data of Snijders
gm01524 | Public CGH data of Snijders
gm01535 | Public CGH data of Snijders
gm01750 | Public CGH data of Snijders
gm02948 | Public CGH data of Snijders
gm03134 | Public CGH data of Snijders
gm03563 | Public CGH data of Snijders
gm03576 | Public CGH data of Snijders
gm04435 | Public CGH data of Snijders
gm05296 | Public CGH data of Snijders
gm07081 | Public CGH data of Snijders
gm07408 | Public CGH data of Snijders
gm10315 | Public CGH data of Snijders
gm13031 | Public CGH data of Snijders
gm13330 | Public CGH data of Snijders
hclustglad | Hierarchical Clustering
kernelpen | Kernelpen function
myPalette | Microarray color palette
P20 | Public CGH data of Veltman
P9 | Public CGH data of Veltman
plotProfile | Plot genomic profile and cytogenetic banding
plotProfile.profileCGH | Plot genomic profile and cytogenetic banding
profileCGH | Objects of Class profileCGH and profileChr
profileChr | Objects of Class profileCGH and profileChr