Package: MetaboAnnotation
Title: Utilities for Annotation of Metabolomics Data
Version: 1.0.0
Description: 
    High level functions to assist in annotation of (metabolomics) data sets.
    These include functions to perform simple tentative annotations based on
    mass matching but also functions to consider m/z and retention times for
    annotation of LC-MS features given that respective reference values are
    available. In addition, the function provides high-level functions to
    simplify matching of LC-MS/MS spectra against spectral libraries and objects
    and functionality to represent and manage such matched data.
Authors@R: 
    c(person(given = "Michael", family = "Witting",
             role = c("aut"),
             email = "michael.witting@helmholtz-muenchen.de",
             comment = c(ORCID = "0000-0002-1462-4426")),
      person(given = "Johannes", family = "Rainer",
             email = "Johannes.Rainer@eurac.edu",
             role = c("aut", "cre"),
             comment = c(ORCID = "0000-0002-6977-7147")),
      person(given = "Andrea", family = "Vicini",
             email = "andrea.vicini@eurac.edu",
             role = c("aut"),
             comment = c(ORCID = "0000-0001-9438-6909")),
      person(given = "Carolin", family = "Huber",
             email = "carolin-elisabeth.huber@ufz.de",
             role = c("aut"),
             comment = c(ORCID = "0000-0002-9355-8948")))
Depends: R (>= 4.0.0)
Imports: BiocGenerics, MsCoreUtils, MetaboCoreUtils, ProtGenerics,
        methods, S4Vectors, Spectra (>= 1.5.7), BiocParallel,
        SummarizedExperiment, QFeatures, graphics
Suggests: testthat, knitr, msdata, BiocStyle, rmarkdown, plotly, shiny,
        shinyjs, DT
License: Artistic-2.0
VignetteBuilder: knitr
BugReports: https://github.com/RforMassSpectrometry/MetaboAnnotation/issues
URL: https://github.com/RforMassSpectrometry/MetaboAnnotation
biocViews: Infrastructure, Metabolomics, MassSpectrometry
Roxygen: list(markdown=TRUE)
RoxygenNote: 7.1.2
git_url: https://git.bioconductor.org/packages/MetaboAnnotation
git_branch: RELEASE_3_15
git_last_commit: 47f0975
git_last_commit_date: 2022-04-26
Date/Publication: 2022-04-26
NeedsCompilation: no
Packaged: 2022-04-26 23:24:18 UTC; biocbuild
Author: Michael Witting [aut] (<https://orcid.org/0000-0002-1462-4426>),
  Johannes Rainer [aut, cre] (<https://orcid.org/0000-0002-6977-7147>),
  Andrea Vicini [aut] (<https://orcid.org/0000-0001-9438-6909>),
  Carolin Huber [aut] (<https://orcid.org/0000-0002-9355-8948>)
Maintainer: Johannes Rainer <Johannes.Rainer@eurac.edu>
Built: R 4.2.0; ; 2022-04-27 14:11:21 UTC; unix
