\name{GenomicScores-deprecated}
\alias{GenomicScores-deprecated}

\title{Deprecated methods in package \sQuote{GenomicScores}}

\description{
  There are currently no deprecated classes or methods in 
  \sQuote{GenomicScores}.
%%  These functions are provided for compatibility with older versions
%%  of \sQuote{GenomicScores} only, and will be defunct at the next release.
}

%% \details{
%%   The following classes are deprecated and will be made defunct; use
%%   the replacement indicated below:
%% 
%%   \itemize{
%%     \item{\code{MafDb}:  The \code{MafDb} class has been replaced by the
%%           \code{\link{GScores-class}} class.}
%%   }
%% 
%%   The following methods are deprecated and will be made defunct; use
%%   the replacement indicated below:
%% 
%%   \itemize{
%%     \item{\code{scores()}:  The \code{scores()} method has been replaced by the
%%           \code{\link{gscores}()} and \code{\link{score}()} methods.}
%%     \item{\code{mafByOverlaps()}:  The \code{mafByOverlaps()} method has been
%%           replaced by the \code{\link{gscores}()} and \code{\link{score}()}
%%           methods.}
%%     \item{\code{mafById()}:  The \code{mafById()} method has been
%%           replaced by the \code{\link{gscores}()} and \code{\link{score}()}
%%           methods.}
%%   }
%% }
\author{
  Robert Castelo <robert.castelo@upf.edu>
}
\keyword{internal}
\keyword{misc}
