plotIdeo {trackViewer} | R Documentation

## plot ideogram

### Description

plot ideogram for one chromosome

### Usage

    plotIdeo(
      ideo,
      chrom = seqlevels(ideo)[1],
      colorSheme = gieStain(),
      gp = gpar(fill = NA),
      ...
    )

### Arguments

`ideo` | output of loadIdeogram.
`chrom` | A length 1 character vector of chromosome name.
`colorSheme` | A character vector of giemsa stain colors.
`gp` | parameters used for grid.roundrect.
`...` | parameters not used.

### Examples

    ## Not run:
    ideo <- loadIdeogram("hg38")
    library(grid)
    grid.newpage()
    plotIdeo(ideo)

    ## End(Not run)

[Package trackViewer version 1.28.1 Index]