# Predict Combined Function of Transcription Factors

## Documentation for package ‘target’ version 1.6.0

- DESCRIPTION file.
- User guides, package vignettes and other documentation.

## Help Pages

target-package | 'target': Predict Combined Function of Transcription Factors.
associated_peaks | Predict associated peaks
direct_targets | Predict direct targets
find_distance | Find the distance between peaks and regions
merge_ranges | Merge peaks and regions GRanges
plot_predictions | Plot the ECDF of ranks by groups
rank_product | Calculate the regions rank products
real_peaks | AR peaks in LNCaP cell line
real_transcripts | Differential expression of DHT treated LNCaP cell line
score_peaks | Calculate peak scores
score_regions | Calculate region scores
sim_peaks | Simulated peaks
sim_transcripts | Simulated transcripts The transcripts chromosome 1 of the mm10 mouse genome with randomly singed statistics assigned to each.
target | 'target': Predict Combined Function of Transcription Factors.
target_app | Run the shiny App
test_predictions | Test the ECDF ranks of groups are from same distribution