humanGBMsampleAC {tLOH} | R Documentation

## Imported dataset of a human glioblastoma spatial transcriptomics sample processed with tLOHImportData.

### Description

A dataset of a human glioblastoma sample containing the allele count (AC) information for 9 spatial transcriptomics clusters

### Usage

    data("humanGBMsampleAC")

### Format

A data frame with 34601 rows and 7 variables:

rsID

  dbSNP rs identifier

CLUSTER

  cluster number

TOTAL

  total number of counts

REF

  counts for the reference allele

ALT

  counts for the alternative allele

CHR

  chromosome number

POS

  genomic position

### Source

Craig Lab data repository

### Examples

    data("humanGBMsampleAC")

[Package tLOH version 1.0.0 Index]