aggregateCHRPlot {tLOH} | R Documentation

## Visualization of data output from the tLOHCalc function, aggregated per chromosome

### Description

Output is a plot of the sum of Log10(1/K) values (K is a Bayes factor) per chromosome for each cluster. The dotted line at y=3 represents threshold for substantial evidence toward Model 2

### Arguments

`df` | An input dataframe with merged cluster data output by tLOHCalc
`sample` | Name of sample for plot title

### Value

Output is a plot where the y axis is sum of Log10(1/K) values (K is a Bayes factor) per chromosome and the x axis is chromosome

### Author(s)

Michelle Webb

### Examples

    data('humanGBMsampleAC')
    df <- tLOHCalc(humanGBMsampleAC)
    aggregateCHRPlot(df,"Example")

[Package tLOH version 1.0.0 Index]