regions {srnadiff} | R Documentation

## Extracts differentially expressed regions of an srnadiffExp object

### Description

This function extracts the differentially expressed regions from `srnadiffExp` object ranked by p-value.

### Usage

    ## S4 method for signature 'srnadiffExp'
    regions(object, pvalue = 1)

### Arguments

`object` | An `srnadiffExp` object.
`pvalue` | Numeric cutoff value for adjusted p-values. Only regions with adjusted p-values equal or lower than specified are returned. Default to 1, all regions are returned.

### Value

A `GenomicRanges` object of the selected differentially expressed regions.

### Examples

    srnaExp <- srnadiffExample()
    srnaExp <- srnadiff(srnaExp)
    regions(srnaExp, pvalue = 0.05)

[Package srnadiff version 1.11.0 Index]