Package: spicyR
Type: Package
Title: Spatial analysis of in situ cytometry data
Version: 1.4.0
Authors@R: c(person("Nicolas", "Canete", email = "nicolas.canete@sydney.edu.au",
    role = c("aut")),
    person("Ellis", "Patrick", email = "ellis.patrick@sydney.edu.au",
    role = c("aut", "cre")))
Description: spicyR provides a series of functions to aid in the analysis of both 
    immunofluorescence and mass cytometry imaging data as well as other assays that 
    can deeply phenotype individual cells and their spatial location.
License: GPL (>=2)
biocViews: SingleCell, CellBasedAssays
Encoding: UTF-8
Depends: R (>= 4.0.0)
VignetteBuilder: knitr
BugReports: https://github.com/ellispatrick/spicyR/issues
Imports: ggplot2, concaveman, BiocParallel, spatstat.core,
        spatstat.geom, lmerTest, BiocGenerics, S4Vectors, lme4,
        methods, mgcv, pheatmap, rlang, grDevices, IRanges, stats,
        data.table, dplyr, tidyr
Suggests: BiocStyle, knitr, rmarkdown
RoxygenNote: 7.1.1
git_url: https://git.bioconductor.org/packages/spicyR
git_branch: RELEASE_3_13
git_last_commit: d3143db
git_last_commit_date: 2021-05-19
Date/Publication: 2021-05-19
NeedsCompilation: no
Packaged: 2021-05-20 02:30:22 UTC; biocbuild
Author: Nicolas Canete [aut],
  Ellis Patrick [aut, cre]
Maintainer: Ellis Patrick <ellis.patrick@sydney.edu.au>
Built: R 4.1.0; ; 2021-05-20 10:11:39 UTC; windows
