signifPlot {spicyR} | R Documentation

## Plots result of signifPlot.

### Description

Plots result of signifPlot.

### Usage

    signifPlot(
      results,
      fdr = FALSE,
      breaks = c(-5, 5, 0.5),
      colors = c("blue", "white", "red"),
      marksToPlot = NULL
    )

### Arguments

`results` | Data frame obtained from spicy.
`fdr` | TRUE if FDR correction is used.
`breaks` | Vector of 3 numbers giving breaks used in pheatmap. The first number is the minimum, the second is the maximum, the third is the number of breaks.
`colors` | Vector of colours to use in pheatmap.
`marksToPlot` | Vector of marks to include in pheatmap.

### Value

a pheatmap object

### Examples

    data(spicyTest)
    signifPlot(spicyTest, breaks=c(-3, 3, 0.5))

[Package spicyR version 1.4.0 Index]