combineSCE {singleCellTK} | R Documentation

## Combine a list of SingleCellExperiment objects as one SingleCellExperiment object

### Description

Combine a list of SingleCellExperiment objects as one SingleCellExperiment object

### Usage

    combineSCE(sceList, by.r, by.c, combined)

### Arguments

`sceList` | A list contains SingleCellExperiment objects. Currently, combineSCE function only support combining SCE objects with assay in dgCMatrix format. It does not support combining SCE with assay in delayedArray format.
`by.r` | Specifications of the columns used for merging rowData. See 'Details'.
`by.c` | Specifications of the columns used for merging colData. See 'Details'.
`combined` | logical; if TRUE, it will combine the list of SingleCellExperiment objects. See 'Details'.

### Value

A SingleCellExperiment object which combines all objects in sceList. The colData is merged.

### Examples

    combinedsce <- combineSCE(list(sce,sce), by.r = NULL, by.c = NULL, combined = TRUE)

[Package singleCellTK version 2.2.0 Index]